Hb_001633_050

Information

Type -
Description -
Location Contig1633: 43356-48207
Sequence    

Annotation

kegg
ID rcu:RCOM_1445710
description hypothetical protein
nr
ID XP_012067330.1
description PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBG4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26853 PE=4 SV=1
Gene Ontology
ID GO:0005622
description histone -specific chaperone chz1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14884: 43478-48029
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001633_050 0.0 - - PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Jatropha curcas]
2 Hb_004116_190 0.0440527666 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 2 [Jatropha curcas]
3 Hb_000777_040 0.0589834493 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
4 Hb_002995_020 0.0613661708 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 2 [Jatropha curcas]
5 Hb_000504_140 0.064302194 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
6 Hb_000656_240 0.0657957432 - - proteasome subunit alpha type, putative [Ricinus communis]
7 Hb_001512_030 0.0660009267 - - PREDICTED: surfeit locus protein 2 [Jatropha curcas]
8 Hb_000236_040 0.0664403515 - - PREDICTED: uncharacterized protein LOC105633150 isoform X1 [Jatropha curcas]
9 Hb_058999_020 0.0671528889 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
10 Hb_000059_370 0.0679715776 - - PREDICTED: U6 snRNA phosphodiesterase [Jatropha curcas]
11 Hb_001221_210 0.0680179282 - - thiF family protein [Populus trichocarpa]
12 Hb_000020_060 0.0687488983 - - PREDICTED: trafficking protein particle complex subunit 4 [Jatropha curcas]
13 Hb_000580_090 0.0689727275 - - PREDICTED: tRNA 2'-phosphotransferase 1 isoform X1 [Jatropha curcas]
14 Hb_005539_280 0.0698425134 - - PREDICTED: uncharacterized protein LOC105644562 [Jatropha curcas]
15 Hb_000676_180 0.0706858121 - - Ubiquitin-conjugating enzyme 16 [Theobroma cacao]
16 Hb_000815_320 0.0717161213 - - PREDICTED: vesicle transport v-SNARE 12-like isoform X2 [Jatropha curcas]
17 Hb_000205_090 0.0726350166 - - hypothetical protein POPTR_0019s03570g [Populus trichocarpa]
18 Hb_000505_040 0.0737354171 - - -
19 Hb_004109_170 0.0739398515 - - PREDICTED: probable ribokinase [Jatropha curcas]
20 Hb_001821_010 0.0740566162 - - PREDICTED: uncharacterized protein C9orf78 [Jatropha curcas]

Gene co-expression network

sample Hb_001633_050 Hb_001633_050 Hb_004116_190 Hb_004116_190 Hb_001633_050--Hb_004116_190 Hb_000777_040 Hb_000777_040 Hb_001633_050--Hb_000777_040 Hb_002995_020 Hb_002995_020 Hb_001633_050--Hb_002995_020 Hb_000504_140 Hb_000504_140 Hb_001633_050--Hb_000504_140 Hb_000656_240 Hb_000656_240 Hb_001633_050--Hb_000656_240 Hb_001512_030 Hb_001512_030 Hb_001633_050--Hb_001512_030 Hb_004116_190--Hb_002995_020 Hb_004116_190--Hb_000656_240 Hb_000020_060 Hb_000020_060 Hb_004116_190--Hb_000020_060 Hb_000676_180 Hb_000676_180 Hb_004116_190--Hb_000676_180 Hb_005846_040 Hb_005846_040 Hb_004116_190--Hb_005846_040 Hb_001009_270 Hb_001009_270 Hb_000777_040--Hb_001009_270 Hb_000985_030 Hb_000985_030 Hb_000777_040--Hb_000985_030 Hb_005779_060 Hb_005779_060 Hb_000777_040--Hb_005779_060 Hb_000206_210 Hb_000206_210 Hb_000777_040--Hb_000206_210 Hb_058999_020 Hb_058999_020 Hb_000777_040--Hb_058999_020 Hb_002995_020--Hb_000020_060 Hb_003787_010 Hb_003787_010 Hb_002995_020--Hb_003787_010 Hb_002995_020--Hb_000656_240 Hb_001123_130 Hb_001123_130 Hb_002995_020--Hb_001123_130 Hb_005539_280 Hb_005539_280 Hb_000504_140--Hb_005539_280 Hb_001758_100 Hb_001758_100 Hb_000504_140--Hb_001758_100 Hb_000504_140--Hb_005779_060 Hb_000317_240 Hb_000317_240 Hb_000504_140--Hb_000317_240 Hb_005618_170 Hb_005618_170 Hb_000504_140--Hb_005618_170 Hb_001504_110 Hb_001504_110 Hb_000656_240--Hb_001504_110 Hb_001195_480 Hb_001195_480 Hb_000656_240--Hb_001195_480 Hb_011512_070 Hb_011512_070 Hb_000656_240--Hb_011512_070 Hb_000580_090 Hb_000580_090 Hb_000656_240--Hb_000580_090 Hb_008554_060 Hb_008554_060 Hb_000656_240--Hb_008554_060 Hb_000505_040 Hb_000505_040 Hb_001512_030--Hb_000505_040 Hb_007904_260 Hb_007904_260 Hb_001512_030--Hb_007904_260 Hb_001512_030--Hb_000985_030 Hb_003605_090 Hb_003605_090 Hb_001512_030--Hb_003605_090 Hb_004889_010 Hb_004889_010 Hb_001512_030--Hb_004889_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.9452 4.97979 8.53857 7.49169 9.57238 8.94845
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.6475 18.6585 13.6829 9.95479 6.23509

CAGE analysis