Hb_001633_100

Information

Type -
Description -
Location Contig1633: 88749-90009
Sequence    

Annotation

kegg
ID rcu:RCOM_1445540
description hypothetical protein
nr
ID XP_012067565.1
description PREDICTED: protein NETWORKED 3A-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L067
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26859 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001633_100 0.0 - - PREDICTED: protein NETWORKED 3A-like [Jatropha curcas]
2 Hb_000016_280 0.1117930803 - - Arginine/serine-rich splicing factor 35 [Theobroma cacao]
3 Hb_183510_010 0.1181150986 - - PREDICTED: RPM1-interacting protein 4-like isoform X2 [Jatropha curcas]
4 Hb_000322_170 0.1203542193 - - PREDICTED: nucleosome assembly protein 1;3 [Jatropha curcas]
5 Hb_000093_130 0.1207867216 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
6 Hb_002843_100 0.1235834671 - - -
7 Hb_000116_570 0.1238049452 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5-like [Jatropha curcas]
8 Hb_001227_110 0.1263051778 - - U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
9 Hb_002133_030 0.1286854321 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
10 Hb_001498_030 0.1308431445 - - PREDICTED: eukaryotic translation initiation factor 3 subunit E [Populus euphratica]
11 Hb_003125_060 0.1319664267 - - PREDICTED: snurportin-1 [Jatropha curcas]
12 Hb_060437_010 0.1340106891 - - E3 ubiquitin protein ligase RIE1 [Morus notabilis]
13 Hb_000076_290 0.1355229824 - - translation factor sui1, putative [Ricinus communis]
14 Hb_002078_420 0.1364613072 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
15 Hb_001178_060 0.1364832031 - - PREDICTED: protein BUD31 homolog 2 isoform X1 [Jatropha curcas]
16 Hb_025048_040 0.1382449347 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
17 Hb_005052_010 0.1391138595 - - PREDICTED: uncharacterized protein LOC103339315 [Prunus mume]
18 Hb_013753_010 0.139875897 - - PREDICTED: uncharacterized protein LOC105647969 isoform X1 [Jatropha curcas]
19 Hb_000152_890 0.1403370085 - - hypothetical protein JCGZ_26265 [Jatropha curcas]
20 Hb_000692_170 0.1404271865 - - PREDICTED: uncharacterized protein LOC105638529 [Jatropha curcas]

Gene co-expression network

sample Hb_001633_100 Hb_001633_100 Hb_000016_280 Hb_000016_280 Hb_001633_100--Hb_000016_280 Hb_183510_010 Hb_183510_010 Hb_001633_100--Hb_183510_010 Hb_000322_170 Hb_000322_170 Hb_001633_100--Hb_000322_170 Hb_000093_130 Hb_000093_130 Hb_001633_100--Hb_000093_130 Hb_002843_100 Hb_002843_100 Hb_001633_100--Hb_002843_100 Hb_000116_570 Hb_000116_570 Hb_001633_100--Hb_000116_570 Hb_000016_280--Hb_000116_570 Hb_101151_020 Hb_101151_020 Hb_000016_280--Hb_101151_020 Hb_001227_110 Hb_001227_110 Hb_000016_280--Hb_001227_110 Hb_000685_080 Hb_000685_080 Hb_000016_280--Hb_000685_080 Hb_003125_060 Hb_003125_060 Hb_000016_280--Hb_003125_060 Hb_010883_080 Hb_010883_080 Hb_000016_280--Hb_010883_080 Hb_000174_200 Hb_000174_200 Hb_183510_010--Hb_000174_200 Hb_000076_290 Hb_000076_290 Hb_183510_010--Hb_000076_290 Hb_001178_060 Hb_001178_060 Hb_183510_010--Hb_001178_060 Hb_183510_010--Hb_000322_170 Hb_002002_020 Hb_002002_020 Hb_183510_010--Hb_002002_020 Hb_005038_020 Hb_005038_020 Hb_183510_010--Hb_005038_020 Hb_000322_170--Hb_001178_060 Hb_000640_210 Hb_000640_210 Hb_000322_170--Hb_000640_210 Hb_005016_030 Hb_005016_030 Hb_000322_170--Hb_005016_030 Hb_004032_350 Hb_004032_350 Hb_000322_170--Hb_004032_350 Hb_000322_170--Hb_000076_290 Hb_000322_170--Hb_000174_200 Hb_000093_130--Hb_001227_110 Hb_000093_130--Hb_000116_570 Hb_001473_190 Hb_001473_190 Hb_000093_130--Hb_001473_190 Hb_000025_750 Hb_000025_750 Hb_000093_130--Hb_000025_750 Hb_007416_200 Hb_007416_200 Hb_000093_130--Hb_007416_200 Hb_074683_020 Hb_074683_020 Hb_000093_130--Hb_074683_020 Hb_002843_100--Hb_002002_020 Hb_001754_170 Hb_001754_170 Hb_002843_100--Hb_001754_170 Hb_002400_390 Hb_002400_390 Hb_002843_100--Hb_002400_390 Hb_002405_020 Hb_002405_020 Hb_002843_100--Hb_002405_020 Hb_003581_110 Hb_003581_110 Hb_002843_100--Hb_003581_110 Hb_000116_570--Hb_010883_080 Hb_000116_570--Hb_000685_080 Hb_000116_570--Hb_001227_110 Hb_009646_050 Hb_009646_050 Hb_000116_570--Hb_009646_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.22629 1.14224 0.268627 0.289058 2.39987 1.86005
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.424994 0.584926 0.46024 0.470895 0

CAGE analysis