Hb_001635_150

Information

Type -
Description -
Location Contig1635: 158734-159033
Sequence    

Annotation

kegg
ID rcu:RCOM_1485740
description hypothetical protein
nr
ID KDP40810.1
description hypothetical protein JCGZ_24809 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L8J0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24809 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001635_150 0.0 - - hypothetical protein JCGZ_24809 [Jatropha curcas]
2 Hb_015057_050 0.2939364718 - - D-alanine aminotransferase, putative [Ricinus communis]
3 Hb_002026_010 0.3075465617 transcription factor TF Family: mTERF hypothetical protein CICLE_v10020375mg [Citrus clementina]
4 Hb_003845_020 0.3109965697 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_143629_070 0.3192232521 - - PREDICTED: uncharacterized protein LOC105647357 [Jatropha curcas]
6 Hb_000222_030 0.3259741103 - - -
7 Hb_000414_110 0.3303074533 - - PREDICTED: MATE efflux family protein 5 isoform X1 [Populus euphratica]
8 Hb_094437_060 0.3320419979 - - PREDICTED: cytochrome B5 isoform D-like [Jatropha curcas]
9 Hb_002232_090 0.3328569925 - - STS14 protein precursor, putative [Ricinus communis]
10 Hb_000025_430 0.3346814274 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
11 Hb_000879_190 0.3373690821 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000120_720 0.3409042124 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
13 Hb_007919_020 0.345774765 - - electron transporter, putative [Ricinus communis]
14 Hb_000320_300 0.3470579974 - - prephenate dehydratase, putative [Ricinus communis]
15 Hb_004976_050 0.3471257568 - - -
16 Hb_007747_140 0.3473724479 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
17 Hb_002974_040 0.3517902638 - - GRF zinc finger containing protein [Medicago truncatula]
18 Hb_001946_220 0.3520855163 - - PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Jatropha curcas]
19 Hb_000368_030 0.353358752 - - PREDICTED: cytokinin dehydrogenase 5 [Jatropha curcas]
20 Hb_028811_010 0.3546727044 - - PREDICTED: uncharacterized protein LOC105650178 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001635_150 Hb_001635_150 Hb_015057_050 Hb_015057_050 Hb_001635_150--Hb_015057_050 Hb_002026_010 Hb_002026_010 Hb_001635_150--Hb_002026_010 Hb_003845_020 Hb_003845_020 Hb_001635_150--Hb_003845_020 Hb_143629_070 Hb_143629_070 Hb_001635_150--Hb_143629_070 Hb_000222_030 Hb_000222_030 Hb_001635_150--Hb_000222_030 Hb_000414_110 Hb_000414_110 Hb_001635_150--Hb_000414_110 Hb_000120_720 Hb_000120_720 Hb_015057_050--Hb_000120_720 Hb_015057_050--Hb_003845_020 Hb_004129_050 Hb_004129_050 Hb_015057_050--Hb_004129_050 Hb_181110_010 Hb_181110_010 Hb_015057_050--Hb_181110_010 Hb_000317_160 Hb_000317_160 Hb_015057_050--Hb_000317_160 Hb_127886_010 Hb_127886_010 Hb_015057_050--Hb_127886_010 Hb_006615_070 Hb_006615_070 Hb_002026_010--Hb_006615_070 Hb_044653_080 Hb_044653_080 Hb_002026_010--Hb_044653_080 Hb_010883_200 Hb_010883_200 Hb_002026_010--Hb_010883_200 Hb_000394_110 Hb_000394_110 Hb_002026_010--Hb_000394_110 Hb_002974_040 Hb_002974_040 Hb_002026_010--Hb_002974_040 Hb_010578_010 Hb_010578_010 Hb_002026_010--Hb_010578_010 Hb_003845_020--Hb_181110_010 Hb_000853_060 Hb_000853_060 Hb_003845_020--Hb_000853_060 Hb_000327_070 Hb_000327_070 Hb_003845_020--Hb_000327_070 Hb_002304_140 Hb_002304_140 Hb_003845_020--Hb_002304_140 Hb_000165_210 Hb_000165_210 Hb_003845_020--Hb_000165_210 Hb_003120_040 Hb_003120_040 Hb_003845_020--Hb_003120_040 Hb_000088_220 Hb_000088_220 Hb_143629_070--Hb_000088_220 Hb_143629_070--Hb_002026_010 Hb_143629_070--Hb_000222_030 Hb_143629_070--Hb_002974_040 Hb_005725_200 Hb_005725_200 Hb_143629_070--Hb_005725_200 Hb_001946_350 Hb_001946_350 Hb_000222_030--Hb_001946_350 Hb_000926_100 Hb_000926_100 Hb_000222_030--Hb_000926_100 Hb_138710_010 Hb_138710_010 Hb_000222_030--Hb_138710_010 Hb_000222_030--Hb_000120_720 Hb_002685_150 Hb_002685_150 Hb_000222_030--Hb_002685_150 Hb_001390_030 Hb_001390_030 Hb_000222_030--Hb_001390_030 Hb_000417_320 Hb_000417_320 Hb_000414_110--Hb_000417_320 Hb_028811_010 Hb_028811_010 Hb_000414_110--Hb_028811_010 Hb_000414_110--Hb_000165_210 Hb_000808_170 Hb_000808_170 Hb_000414_110--Hb_000808_170 Hb_000061_090 Hb_000061_090 Hb_000414_110--Hb_000061_090 Hb_002291_010 Hb_002291_010 Hb_000414_110--Hb_002291_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.315086 0.327978 0.684767 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.374293 0.29483 0.419256 1.2316 0

CAGE analysis