Hb_001638_120

Information

Type -
Description -
Location Contig1638: 115752-120886
Sequence    

Annotation

kegg
ID pop:POPTR_0014s10000g
description POPTRDRAFT_824057; CBL-interacting protein kinase 9
nr
ID XP_012083118.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 9 [Jatropha curcas]
swissprot
ID Q9MAM1
description CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2
trembl
ID A0A067K053
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_14199 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting protein kinase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14993: 115874-121187 , PASA_asmbl_14994: 115874-121187 , PASA_asmbl_14995: 117633-117831 , PASA_asmbl_14998: 120048-121187
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001638_120 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 9 [Jatropha curcas]
2 Hb_011918_030 0.1011775987 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
3 Hb_004223_080 0.118180554 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
4 Hb_001025_140 0.1213413715 - - hypothetical protein POPTR_0015s09180g [Populus trichocarpa]
5 Hb_003688_220 0.1339375747 - - unknown [Populus trichocarpa]
6 Hb_000134_260 0.1359556415 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
7 Hb_107078_010 0.1360889782 - - -
8 Hb_001541_190 0.1387878885 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
9 Hb_004712_090 0.1388395073 - - Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]
10 Hb_000395_120 0.1399749524 - - Stellacyanin, putative [Ricinus communis]
11 Hb_000320_040 0.1433580607 - - ATP binding protein, putative [Ricinus communis]
12 Hb_000905_100 0.1501941522 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
13 Hb_173029_030 0.1506325707 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000308_010 0.1523243307 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
15 Hb_000059_030 0.1550357457 - - PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
16 Hb_000020_080 0.1553425834 transcription factor TF Family: MYB hypothetical protein JCGZ_09080 [Jatropha curcas]
17 Hb_001862_030 0.1562738654 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
18 Hb_008250_020 0.1599175366 - - PREDICTED: U-box domain-containing protein 15-like isoform X1 [Jatropha curcas]
19 Hb_000002_370 0.160331492 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
20 Hb_000809_130 0.1615281294 - - PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_001638_120 Hb_001638_120 Hb_011918_030 Hb_011918_030 Hb_001638_120--Hb_011918_030 Hb_004223_080 Hb_004223_080 Hb_001638_120--Hb_004223_080 Hb_001025_140 Hb_001025_140 Hb_001638_120--Hb_001025_140 Hb_003688_220 Hb_003688_220 Hb_001638_120--Hb_003688_220 Hb_000134_260 Hb_000134_260 Hb_001638_120--Hb_000134_260 Hb_107078_010 Hb_107078_010 Hb_001638_120--Hb_107078_010 Hb_008173_130 Hb_008173_130 Hb_011918_030--Hb_008173_130 Hb_011918_030--Hb_003688_220 Hb_011918_030--Hb_107078_010 Hb_011918_030--Hb_000134_260 Hb_001366_390 Hb_001366_390 Hb_011918_030--Hb_001366_390 Hb_000809_130 Hb_000809_130 Hb_004223_080--Hb_000809_130 Hb_000002_370 Hb_000002_370 Hb_004223_080--Hb_000002_370 Hb_004223_080--Hb_001025_140 Hb_000392_170 Hb_000392_170 Hb_004223_080--Hb_000392_170 Hb_000349_250 Hb_000349_250 Hb_004223_080--Hb_000349_250 Hb_001307_020 Hb_001307_020 Hb_004223_080--Hb_001307_020 Hb_000438_200 Hb_000438_200 Hb_001025_140--Hb_000438_200 Hb_000059_030 Hb_000059_030 Hb_001025_140--Hb_000059_030 Hb_115962_010 Hb_115962_010 Hb_001025_140--Hb_115962_010 Hb_000049_030 Hb_000049_030 Hb_001025_140--Hb_000049_030 Hb_028487_040 Hb_028487_040 Hb_003688_220--Hb_028487_040 Hb_000320_040 Hb_000320_040 Hb_003688_220--Hb_000320_040 Hb_001776_130 Hb_001776_130 Hb_003688_220--Hb_001776_130 Hb_151103_010 Hb_151103_010 Hb_003688_220--Hb_151103_010 Hb_003688_220--Hb_000134_260 Hb_004712_090 Hb_004712_090 Hb_000134_260--Hb_004712_090 Hb_004551_010 Hb_004551_010 Hb_000134_260--Hb_004551_010 Hb_002374_200 Hb_002374_200 Hb_000134_260--Hb_002374_200 Hb_000035_140 Hb_000035_140 Hb_000134_260--Hb_000035_140 Hb_107078_010--Hb_008173_130 Hb_000260_240 Hb_000260_240 Hb_107078_010--Hb_000260_240 Hb_000020_080 Hb_000020_080 Hb_107078_010--Hb_000020_080 Hb_000076_090 Hb_000076_090 Hb_107078_010--Hb_000076_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.78757 43.2316 119.394 44.9266 1.64837 3.74065
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.431502 0.696023 0.19336 4.19257 24.4607

CAGE analysis