Hb_001646_010

Information

Type -
Description -
Location Contig1646: 31066-33204
Sequence    

Annotation

kegg
ID rcu:RCOM_1115830
description hypothetical protein
nr
ID KDP44500.1
description hypothetical protein JCGZ_16333 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LIP3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16333 PE=4 SV=1
Gene Ontology
ID GO:0004674
description chitin elicitor receptor kinase 1-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15133: 31263-31478
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001646_010 0.0 - - hypothetical protein JCGZ_16333 [Jatropha curcas]
2 Hb_044486_040 0.0501916782 - - PREDICTED: ion channel CASTOR-like [Malus domestica]
3 Hb_001341_160 0.0794887794 - - PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X2 [Jatropha curcas]
4 Hb_002374_210 0.0824821563 - - PREDICTED: uncharacterized protein LOC105638976 [Jatropha curcas]
5 Hb_011202_030 0.0851412582 - - arsenite-resistance protein, putative [Ricinus communis]
6 Hb_000010_420 0.0859477658 - - Callose synthase 10 [Morus notabilis]
7 Hb_002005_030 0.0871674488 - - PREDICTED: uncharacterized protein LOC105649755 [Jatropha curcas]
8 Hb_006907_140 0.0890655842 - - conserved hypothetical protein [Ricinus communis]
9 Hb_148682_010 0.0988008377 - - PREDICTED: uncharacterized protein LOC105630720 [Jatropha curcas]
10 Hb_001904_030 0.1000191119 - - PREDICTED: importin-5 [Jatropha curcas]
11 Hb_000172_340 0.1007251063 - - PREDICTED: uncharacterized protein LOC101261327 [Solanum lycopersicum]
12 Hb_005765_040 0.1007809849 - - transcription elongation factor s-II, putative [Ricinus communis]
13 Hb_000117_070 0.1023884883 - - PREDICTED: branchpoint-bridging protein [Jatropha curcas]
14 Hb_000243_130 0.1036835434 - - hypothetical protein M569_10795, partial [Genlisea aurea]
15 Hb_001221_090 0.1037396414 - - PREDICTED: uncharacterized protein LOC105640211 isoform X1 [Jatropha curcas]
16 Hb_000133_090 0.105488587 - - PREDICTED: uncharacterized protein LOC105629320 [Jatropha curcas]
17 Hb_002025_270 0.1063784959 - - PREDICTED: uncharacterized protein At4g15970 isoform X1 [Jatropha curcas]
18 Hb_003216_090 0.1075156733 - - PREDICTED: nuclear pore complex protein NUP133 isoform X1 [Jatropha curcas]
19 Hb_005298_020 0.1077835595 - - PREDICTED: anaphase-promoting complex subunit 2 [Jatropha curcas]
20 Hb_000260_780 0.1081350918 - - PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Jatropha curcas]

Gene co-expression network

sample Hb_001646_010 Hb_001646_010 Hb_044486_040 Hb_044486_040 Hb_001646_010--Hb_044486_040 Hb_001341_160 Hb_001341_160 Hb_001646_010--Hb_001341_160 Hb_002374_210 Hb_002374_210 Hb_001646_010--Hb_002374_210 Hb_011202_030 Hb_011202_030 Hb_001646_010--Hb_011202_030 Hb_000010_420 Hb_000010_420 Hb_001646_010--Hb_000010_420 Hb_002005_030 Hb_002005_030 Hb_001646_010--Hb_002005_030 Hb_000243_130 Hb_000243_130 Hb_044486_040--Hb_000243_130 Hb_001221_090 Hb_001221_090 Hb_044486_040--Hb_001221_090 Hb_001904_030 Hb_001904_030 Hb_044486_040--Hb_001904_030 Hb_044486_040--Hb_011202_030 Hb_044486_040--Hb_001341_160 Hb_003604_050 Hb_003604_050 Hb_001341_160--Hb_003604_050 Hb_000172_340 Hb_000172_340 Hb_001341_160--Hb_000172_340 Hb_001341_160--Hb_000010_420 Hb_001341_160--Hb_001904_030 Hb_004223_160 Hb_004223_160 Hb_001341_160--Hb_004223_160 Hb_008948_140 Hb_008948_140 Hb_001341_160--Hb_008948_140 Hb_005298_020 Hb_005298_020 Hb_002374_210--Hb_005298_020 Hb_002374_210--Hb_044486_040 Hb_002374_210--Hb_000243_130 Hb_007894_160 Hb_007894_160 Hb_002374_210--Hb_007894_160 Hb_004064_050 Hb_004064_050 Hb_002374_210--Hb_004064_050 Hb_011202_030--Hb_001221_090 Hb_007283_030 Hb_007283_030 Hb_011202_030--Hb_007283_030 Hb_011202_030--Hb_001904_030 Hb_155159_010 Hb_155159_010 Hb_011202_030--Hb_155159_010 Hb_009476_090 Hb_009476_090 Hb_011202_030--Hb_009476_090 Hb_001259_120 Hb_001259_120 Hb_000010_420--Hb_001259_120 Hb_004645_070 Hb_004645_070 Hb_000010_420--Hb_004645_070 Hb_001167_050 Hb_001167_050 Hb_000010_420--Hb_001167_050 Hb_000010_420--Hb_001904_030 Hb_009615_160 Hb_009615_160 Hb_000010_420--Hb_009615_160 Hb_002005_030--Hb_000172_340 Hb_006907_140 Hb_006907_140 Hb_002005_030--Hb_006907_140 Hb_002005_030--Hb_001341_160 Hb_002005_030--Hb_000010_420 Hb_002005_030--Hb_001904_030 Hb_007245_020 Hb_007245_020 Hb_002005_030--Hb_007245_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.95378 8.50482 4.79306 4.30775 4.07885 3.62054
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.943244 0.688696 1.82096 6.68989 4.467

CAGE analysis