Hb_001655_080

Information

Type -
Description -
Location Contig1655: 81658-85850
Sequence    

Annotation

kegg
ID rcu:RCOM_1449110
description Purple acid phosphatase precursor, putative (EC:3.1.3.2)
nr
ID XP_002512962.1
description Purple acid phosphatase precursor, putative [Ricinus communis]
swissprot
ID Q9SDZ9
description Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1
trembl
ID B9RHA3
description Purple acid phosphatase OS=Ricinus communis GN=RCOM_1449110 PE=3 SV=1
Gene Ontology
ID GO:0005829
description purple acid phosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15248: 82296-86016
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001655_080 0.0 - - Purple acid phosphatase precursor, putative [Ricinus communis]
2 Hb_000358_160 0.0693278495 - - PREDICTED: uncharacterized protein LOC105637769 isoform X1 [Jatropha curcas]
3 Hb_092516_010 0.0811680093 - - hypothetical protein JCGZ_12248 [Jatropha curcas]
4 Hb_027684_010 0.0827706757 - - hypothetical protein RCOM_0504250 [Ricinus communis]
5 Hb_046590_010 0.0909123921 - - Cycloeucalenol cycloisomerase, putative [Ricinus communis]
6 Hb_001269_060 0.0982108077 - - PREDICTED: probable receptor-like protein kinase At1g80640 isoform X1 [Jatropha curcas]
7 Hb_001638_190 0.1001080882 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
8 Hb_000890_170 0.1001725478 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
9 Hb_000313_250 0.102200936 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
10 Hb_021443_060 0.1050630757 - - PTH-1 family protein [Populus trichocarpa]
11 Hb_000345_400 0.1076361873 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000188_070 0.1079995701 - - calcineurin-like phosphoesterase [Manihot esculenta]
13 Hb_002066_100 0.1096583665 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
14 Hb_002710_040 0.1096673485 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
15 Hb_005116_130 0.110638788 - - PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Jatropha curcas]
16 Hb_000692_060 0.1122721703 - - calcium-dependent protein kinase, putative [Ricinus communis]
17 Hb_000294_020 0.1130786858 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
18 Hb_000236_130 0.1161170098 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
19 Hb_001442_050 0.1182105335 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Jatropha curcas]
20 Hb_001958_030 0.1185183208 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]

Gene co-expression network

sample Hb_001655_080 Hb_001655_080 Hb_000358_160 Hb_000358_160 Hb_001655_080--Hb_000358_160 Hb_092516_010 Hb_092516_010 Hb_001655_080--Hb_092516_010 Hb_027684_010 Hb_027684_010 Hb_001655_080--Hb_027684_010 Hb_046590_010 Hb_046590_010 Hb_001655_080--Hb_046590_010 Hb_001269_060 Hb_001269_060 Hb_001655_080--Hb_001269_060 Hb_001638_190 Hb_001638_190 Hb_001655_080--Hb_001638_190 Hb_000358_160--Hb_092516_010 Hb_000358_160--Hb_027684_010 Hb_021443_060 Hb_021443_060 Hb_000358_160--Hb_021443_060 Hb_000313_250 Hb_000313_250 Hb_000358_160--Hb_000313_250 Hb_000345_400 Hb_000345_400 Hb_000358_160--Hb_000345_400 Hb_000294_020 Hb_000294_020 Hb_092516_010--Hb_000294_020 Hb_092516_010--Hb_021443_060 Hb_110266_010 Hb_110266_010 Hb_092516_010--Hb_110266_010 Hb_092516_010--Hb_000313_250 Hb_000722_030 Hb_000722_030 Hb_027684_010--Hb_000722_030 Hb_002066_100 Hb_002066_100 Hb_027684_010--Hb_002066_100 Hb_002518_040 Hb_002518_040 Hb_027684_010--Hb_002518_040 Hb_027684_010--Hb_021443_060 Hb_005116_130 Hb_005116_130 Hb_046590_010--Hb_005116_130 Hb_000188_070 Hb_000188_070 Hb_046590_010--Hb_000188_070 Hb_000494_010 Hb_000494_010 Hb_046590_010--Hb_000494_010 Hb_000110_240 Hb_000110_240 Hb_046590_010--Hb_000110_240 Hb_104014_010 Hb_104014_010 Hb_046590_010--Hb_104014_010 Hb_001377_120 Hb_001377_120 Hb_001269_060--Hb_001377_120 Hb_121313_010 Hb_121313_010 Hb_001269_060--Hb_121313_010 Hb_000645_260 Hb_000645_260 Hb_001269_060--Hb_000645_260 Hb_000302_360 Hb_000302_360 Hb_001269_060--Hb_000302_360 Hb_004218_140 Hb_004218_140 Hb_001269_060--Hb_004218_140 Hb_001269_060--Hb_027684_010 Hb_001638_190--Hb_000345_400 Hb_001638_190--Hb_000188_070 Hb_000692_060 Hb_000692_060 Hb_001638_190--Hb_000692_060 Hb_001958_030 Hb_001958_030 Hb_001638_190--Hb_001958_030 Hb_001638_190--Hb_000358_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.405195 4.42405 43.387 12.7203 0.06845 0.104369
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.428609 0.0632289 0.318292 2.15003 19.546

CAGE analysis