Hb_001660_040

Information

Type -
Description -
Location Contig1660: 30529-32613
Sequence    

Annotation

kegg
ID rcu:RCOM_1035000
description receptor protein kinase, putative (EC:2.7.11.30 1.3.1.74)
nr
ID XP_012067859.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID B9RJJ2
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1035000 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001660_040 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
2 Hb_000288_140 0.0595307816 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 35 [Jatropha curcas]
3 Hb_000005_350 0.0915414534 - - PREDICTED: uncharacterized protein LOC105634263 [Jatropha curcas]
4 Hb_010334_040 0.1062854732 - - PREDICTED: uncharacterized protein LOC105108579 [Populus euphratica]
5 Hb_005211_090 0.1068733335 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
6 Hb_000025_740 0.1091481683 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
7 Hb_011861_020 0.1103307162 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
8 Hb_005010_040 0.1109602752 - - PREDICTED: uncharacterized protein LOC105630824 [Jatropha curcas]
9 Hb_009627_040 0.1131838798 - - Lipase class 3-related protein, putative [Theobroma cacao]
10 Hb_011063_060 0.1164005826 - - PREDICTED: endochitinase-like [Jatropha curcas]
11 Hb_004079_110 0.1164590366 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
12 Hb_006949_030 0.1165911973 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_150730_010 0.1222759334 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
14 Hb_000589_100 0.1272171588 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
15 Hb_006711_020 0.1277108605 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
16 Hb_002391_350 0.1279071165 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
17 Hb_005116_010 0.1295874942 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
18 Hb_009778_050 0.1300609405 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
19 Hb_000684_490 0.1303327468 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
20 Hb_000276_030 0.1307225075 - - dimethylaniline monooxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001660_040 Hb_001660_040 Hb_000288_140 Hb_000288_140 Hb_001660_040--Hb_000288_140 Hb_000005_350 Hb_000005_350 Hb_001660_040--Hb_000005_350 Hb_010334_040 Hb_010334_040 Hb_001660_040--Hb_010334_040 Hb_005211_090 Hb_005211_090 Hb_001660_040--Hb_005211_090 Hb_000025_740 Hb_000025_740 Hb_001660_040--Hb_000025_740 Hb_011861_020 Hb_011861_020 Hb_001660_040--Hb_011861_020 Hb_001609_080 Hb_001609_080 Hb_000288_140--Hb_001609_080 Hb_058526_010 Hb_058526_010 Hb_000288_140--Hb_058526_010 Hb_000288_140--Hb_000005_350 Hb_003166_040 Hb_003166_040 Hb_000288_140--Hb_003166_040 Hb_127743_030 Hb_127743_030 Hb_000288_140--Hb_127743_030 Hb_000005_350--Hb_011861_020 Hb_000005_350--Hb_010334_040 Hb_000589_100 Hb_000589_100 Hb_000005_350--Hb_000589_100 Hb_000684_490 Hb_000684_490 Hb_000005_350--Hb_000684_490 Hb_116469_010 Hb_116469_010 Hb_000005_350--Hb_116469_010 Hb_001691_060 Hb_001691_060 Hb_000005_350--Hb_001691_060 Hb_005116_010 Hb_005116_010 Hb_010334_040--Hb_005116_010 Hb_010334_040--Hb_000025_740 Hb_010334_040--Hb_000684_490 Hb_000471_010 Hb_000471_010 Hb_010334_040--Hb_000471_010 Hb_005010_040 Hb_005010_040 Hb_010334_040--Hb_005010_040 Hb_009627_040 Hb_009627_040 Hb_005211_090--Hb_009627_040 Hb_001514_070 Hb_001514_070 Hb_005211_090--Hb_001514_070 Hb_000011_120 Hb_000011_120 Hb_005211_090--Hb_000011_120 Hb_002391_350 Hb_002391_350 Hb_005211_090--Hb_002391_350 Hb_005237_040 Hb_005237_040 Hb_005211_090--Hb_005237_040 Hb_001329_110 Hb_001329_110 Hb_005211_090--Hb_001329_110 Hb_002749_070 Hb_002749_070 Hb_000025_740--Hb_002749_070 Hb_000025_740--Hb_000005_350 Hb_001104_210 Hb_001104_210 Hb_000025_740--Hb_001104_210 Hb_004544_070 Hb_004544_070 Hb_000025_740--Hb_004544_070 Hb_164283_010 Hb_164283_010 Hb_000025_740--Hb_164283_010 Hb_011861_020--Hb_000471_010 Hb_150730_010 Hb_150730_010 Hb_011861_020--Hb_150730_010 Hb_011861_020--Hb_116469_010 Hb_000057_180 Hb_000057_180 Hb_011861_020--Hb_000057_180 Hb_011861_020--Hb_000684_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.123783 0.0956421 0.0834576 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.465344 0.0358817

CAGE analysis