Hb_001660_090

Information

Type -
Description -
Location Contig1660: 83792-87811
Sequence    

Annotation

kegg
ID gmx:100800698
description stromal 70 kDa heat shock-related protein, chloroplastic-like
nr
ID XP_012079755.1
description PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Jatropha curcas]
swissprot
ID Q02028
description Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1
trembl
ID A0A067KH91
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14850 PE=3 SV=1
Gene Ontology
ID GO:0005524
description stromal 70 kda heat shock-related chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15299: 82692-82835 , PASA_asmbl_15300: 82991-83094 , PASA_asmbl_15301: 85617-86116
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001660_090 0.0 - - PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Jatropha curcas]
2 Hb_001053_030 0.1962802997 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
3 Hb_002609_090 0.2026993629 - - PREDICTED: phosphomethylpyrimidine synthase, chloroplastic isoform X2 [Jatropha curcas]
4 Hb_001638_040 0.2029255867 - - Nucleobase-ascorbate transporter 3 [Glycine soja]
5 Hb_003633_140 0.2062287564 - - PREDICTED: uncharacterized protein LOC105647486 isoform X1 [Jatropha curcas]
6 Hb_003849_260 0.2079139413 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
7 Hb_000836_120 0.2080975084 - - syntaxin, putative [Ricinus communis]
8 Hb_005194_030 0.2118183799 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
9 Hb_001999_250 0.2127184785 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
10 Hb_124677_060 0.2134743686 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
11 Hb_003349_010 0.2136355998 desease resistance Gene Name: NB-ARC hypothetical protein CICLE_v10023911mg [Citrus clementina]
12 Hb_000449_050 0.2157277088 - - Protein bem46, putative [Ricinus communis]
13 Hb_002417_060 0.2182779343 - - Cell division cycle protein, putative [Ricinus communis]
14 Hb_001396_260 0.2185505126 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
15 Hb_006501_060 0.2224876998 - - PREDICTED: lachrymatory-factor synthase-like [Jatropha curcas]
16 Hb_004096_080 0.2245711945 - - PREDICTED: IST1 homolog [Jatropha curcas]
17 Hb_000340_110 0.2258592921 - - PREDICTED: mediator of RNA polymerase II transcription subunit 33B isoform X1 [Jatropha curcas]
18 Hb_000173_480 0.2259027926 - - PREDICTED: calcium-binding protein 39 [Jatropha curcas]
19 Hb_144824_010 0.2264903161 - - hypothetical protein POPTR_0019s02110g [Populus trichocarpa]
20 Hb_164010_070 0.2288881317 - - Paramyosin, putative [Ricinus communis]

Gene co-expression network

sample Hb_001660_090 Hb_001660_090 Hb_001053_030 Hb_001053_030 Hb_001660_090--Hb_001053_030 Hb_002609_090 Hb_002609_090 Hb_001660_090--Hb_002609_090 Hb_001638_040 Hb_001638_040 Hb_001660_090--Hb_001638_040 Hb_003633_140 Hb_003633_140 Hb_001660_090--Hb_003633_140 Hb_003849_260 Hb_003849_260 Hb_001660_090--Hb_003849_260 Hb_000836_120 Hb_000836_120 Hb_001660_090--Hb_000836_120 Hb_124677_060 Hb_124677_060 Hb_001053_030--Hb_124677_060 Hb_000340_110 Hb_000340_110 Hb_001053_030--Hb_000340_110 Hb_002745_010 Hb_002745_010 Hb_001053_030--Hb_002745_010 Hb_000336_140 Hb_000336_140 Hb_001053_030--Hb_000336_140 Hb_000243_380 Hb_000243_380 Hb_001053_030--Hb_000243_380 Hb_144824_010 Hb_144824_010 Hb_001053_030--Hb_144824_010 Hb_002609_090--Hb_003633_140 Hb_164010_070 Hb_164010_070 Hb_002609_090--Hb_164010_070 Hb_002609_090--Hb_000340_110 Hb_000032_310 Hb_000032_310 Hb_002609_090--Hb_000032_310 Hb_002609_090--Hb_144824_010 Hb_006683_040 Hb_006683_040 Hb_002609_090--Hb_006683_040 Hb_010831_020 Hb_010831_020 Hb_001638_040--Hb_010831_020 Hb_000540_120 Hb_000540_120 Hb_001638_040--Hb_000540_120 Hb_000449_050 Hb_000449_050 Hb_001638_040--Hb_000449_050 Hb_001638_040--Hb_164010_070 Hb_000853_030 Hb_000853_030 Hb_001638_040--Hb_000853_030 Hb_002739_150 Hb_002739_150 Hb_001638_040--Hb_002739_150 Hb_028795_010 Hb_028795_010 Hb_003633_140--Hb_028795_010 Hb_002316_050 Hb_002316_050 Hb_003633_140--Hb_002316_050 Hb_001999_250 Hb_001999_250 Hb_003633_140--Hb_001999_250 Hb_007257_050 Hb_007257_050 Hb_003633_140--Hb_007257_050 Hb_031089_030 Hb_031089_030 Hb_003633_140--Hb_031089_030 Hb_002235_240 Hb_002235_240 Hb_003849_260--Hb_002235_240 Hb_003849_260--Hb_000836_120 Hb_001141_360 Hb_001141_360 Hb_003849_260--Hb_001141_360 Hb_004800_190 Hb_004800_190 Hb_003849_260--Hb_004800_190 Hb_001584_220 Hb_001584_220 Hb_003849_260--Hb_001584_220 Hb_002686_280 Hb_002686_280 Hb_003849_260--Hb_002686_280 Hb_002273_050 Hb_002273_050 Hb_000836_120--Hb_002273_050 Hb_000836_120--Hb_002235_240 Hb_129204_060 Hb_129204_060 Hb_000836_120--Hb_129204_060 Hb_000215_410 Hb_000215_410 Hb_000836_120--Hb_000215_410 Hb_000836_120--Hb_001638_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.12594 44.2923 0.707309 1.24712 30.9858 14.2801
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.2581 7.22304 3.59728 8.89804 1.41483

CAGE analysis