Hb_001674_030

Information

Type -
Description -
Location Contig1674: 93503-94843
Sequence    

Annotation

kegg
ID rcu:RCOM_0639540
description potassium channel tetramerization domain-containing protein, putative
nr
ID XP_012071496.1
description PREDICTED: BTB/POZ domain-containing protein At2g24240 [Jatropha curcas]
swissprot
ID Q9ZUH1
description BTB/POZ domain-containing protein At2g24240 OS=Arabidopsis thaliana GN=At2g24240 PE=2 SV=1
trembl
ID A0A067KR24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04024 PE=4 SV=1
Gene Ontology
ID GO:0005634
description btb poz domain-containing protein at2g24240

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15493: 95030-95497
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001674_030 0.0 - - PREDICTED: BTB/POZ domain-containing protein At2g24240 [Jatropha curcas]
2 Hb_007850_090 0.069259299 - - PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
3 Hb_000072_120 0.0698890886 - - serine/threonine protein kinase, putative [Ricinus communis]
4 Hb_000329_230 0.0717589779 - - PREDICTED: uncharacterized protein LOC105643152 [Jatropha curcas]
5 Hb_003906_200 0.0770302954 - - PREDICTED: zinc finger CCCH domain-containing protein 48 [Jatropha curcas]
6 Hb_000009_500 0.0774845339 - - PREDICTED: NASP-related protein sim3 [Jatropha curcas]
7 Hb_000402_230 0.0787793907 - - PREDICTED: sorting nexin 2A-like isoform X1 [Jatropha curcas]
8 Hb_008253_020 0.0810006006 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
9 Hb_028962_020 0.0826624715 - - hypothetical protein POPTR_0016s00660g [Populus trichocarpa]
10 Hb_031042_050 0.0833943887 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
11 Hb_004143_100 0.0837911233 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000363_240 0.0841358802 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
13 Hb_003617_020 0.0857980575 - - PREDICTED: uncharacterized protein LOC105638179 [Jatropha curcas]
14 Hb_001716_020 0.0870213712 - - hydrolase, putative [Ricinus communis]
15 Hb_007062_030 0.0871910983 - - hypothetical protein VITISV_039033 [Vitis vinifera]
16 Hb_002492_010 0.0874859145 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
17 Hb_008937_010 0.087724721 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X2 [Jatropha curcas]
18 Hb_000487_380 0.0880240617 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
19 Hb_001473_160 0.0880261194 - - Vesicle-associated membrane protein, putative [Ricinus communis]
20 Hb_000028_130 0.0882233329 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001674_030 Hb_001674_030 Hb_007850_090 Hb_007850_090 Hb_001674_030--Hb_007850_090 Hb_000072_120 Hb_000072_120 Hb_001674_030--Hb_000072_120 Hb_000329_230 Hb_000329_230 Hb_001674_030--Hb_000329_230 Hb_003906_200 Hb_003906_200 Hb_001674_030--Hb_003906_200 Hb_000009_500 Hb_000009_500 Hb_001674_030--Hb_000009_500 Hb_000402_230 Hb_000402_230 Hb_001674_030--Hb_000402_230 Hb_003544_110 Hb_003544_110 Hb_007850_090--Hb_003544_110 Hb_000525_010 Hb_000525_010 Hb_007850_090--Hb_000525_010 Hb_007850_090--Hb_000072_120 Hb_003078_020 Hb_003078_020 Hb_007850_090--Hb_003078_020 Hb_009627_030 Hb_009627_030 Hb_007850_090--Hb_009627_030 Hb_001473_160 Hb_001473_160 Hb_000072_120--Hb_001473_160 Hb_000072_120--Hb_000329_230 Hb_000072_120--Hb_003906_200 Hb_004030_080 Hb_004030_080 Hb_000072_120--Hb_004030_080 Hb_001679_050 Hb_001679_050 Hb_000072_120--Hb_001679_050 Hb_000329_230--Hb_001473_160 Hb_003617_020 Hb_003617_020 Hb_000329_230--Hb_003617_020 Hb_000390_250 Hb_000390_250 Hb_000329_230--Hb_000390_250 Hb_000329_230--Hb_003906_200 Hb_112198_010 Hb_112198_010 Hb_003906_200--Hb_112198_010 Hb_002492_010 Hb_002492_010 Hb_003906_200--Hb_002492_010 Hb_004143_100 Hb_004143_100 Hb_003906_200--Hb_004143_100 Hb_003906_200--Hb_001473_160 Hb_003544_060 Hb_003544_060 Hb_003906_200--Hb_003544_060 Hb_011849_040 Hb_011849_040 Hb_000009_500--Hb_011849_040 Hb_000009_500--Hb_000402_230 Hb_079326_020 Hb_079326_020 Hb_000009_500--Hb_079326_020 Hb_002026_210 Hb_002026_210 Hb_000009_500--Hb_002026_210 Hb_004109_230 Hb_004109_230 Hb_000009_500--Hb_004109_230 Hb_000614_210 Hb_000614_210 Hb_000009_500--Hb_000614_210 Hb_000402_230--Hb_004143_100 Hb_001089_050 Hb_001089_050 Hb_000402_230--Hb_001089_050 Hb_008253_020 Hb_008253_020 Hb_000402_230--Hb_008253_020 Hb_003866_080 Hb_003866_080 Hb_000402_230--Hb_003866_080 Hb_000402_230--Hb_011849_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.0604 22.6467 9.94185 21.2069 10.2964 15.8941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1333 9.01015 14.6524 11.6912 11.7655

CAGE analysis