Hb_001680_020

Information

Type desease resistance
Description Gene Name: RPW8
Location Contig1680: 17349-20599
Sequence    

Annotation

kegg
ID rcu:RCOM_0602290
description Disease resistance protein ADR1, putative
nr
ID XP_002522331.1
description Disease resistance protein ADR1, putative [Ricinus communis]
swissprot
ID Q9FKZ1
description Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1
trembl
ID B9S8L2
description Disease resistance protein ADR1, putative OS=Ricinus communis GN=RCOM_0602290 PE=4 SV=1
Gene Ontology
ID GO:0005524
description probable disease resistance protein at5g66900

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15604: 17216-18501 , PASA_asmbl_15605: 18648-19969 , PASA_asmbl_15606: 20065-20487
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001680_020 0.0 desease resistance Gene Name: RPW8 Disease resistance protein ADR1, putative [Ricinus communis]
2 Hb_006501_080 0.0704496142 - - PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
3 Hb_006620_030 0.0880743924 - - nitrate reductase, putative [Ricinus communis]
4 Hb_016297_010 0.0932619778 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
5 Hb_007007_100 0.101611171 - - PREDICTED: subtilisin-like protease SBT1.1 [Jatropha curcas]
6 Hb_000890_170 0.1035778773 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
7 Hb_027684_010 0.1047713082 - - hypothetical protein RCOM_0504250 [Ricinus communis]
8 Hb_000005_060 0.1074354784 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
9 Hb_004308_030 0.1119793795 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
10 Hb_023582_010 0.1120400213 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005488_210 0.113871067 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
12 Hb_000313_250 0.1143120189 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
13 Hb_004202_030 0.1152995157 - - PREDICTED: uncharacterized protein LOC103449702 [Malus domestica]
14 Hb_023827_030 0.1153075683 - - PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Populus euphratica]
15 Hb_000236_130 0.1155294597 - - PREDICTED: protein ECERIFERUM 26 [Jatropha curcas]
16 Hb_000007_330 0.1160537197 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
17 Hb_105148_020 0.1164502146 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
18 Hb_129956_010 0.1204260162 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
19 Hb_032731_010 0.121166102 - - RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
20 Hb_007313_030 0.1213759631 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]

Gene co-expression network

sample Hb_001680_020 Hb_001680_020 Hb_006501_080 Hb_006501_080 Hb_001680_020--Hb_006501_080 Hb_006620_030 Hb_006620_030 Hb_001680_020--Hb_006620_030 Hb_016297_010 Hb_016297_010 Hb_001680_020--Hb_016297_010 Hb_007007_100 Hb_007007_100 Hb_001680_020--Hb_007007_100 Hb_000890_170 Hb_000890_170 Hb_001680_020--Hb_000890_170 Hb_027684_010 Hb_027684_010 Hb_001680_020--Hb_027684_010 Hb_006501_080--Hb_006620_030 Hb_004308_030 Hb_004308_030 Hb_006501_080--Hb_004308_030 Hb_004202_030 Hb_004202_030 Hb_006501_080--Hb_004202_030 Hb_029262_010 Hb_029262_010 Hb_006501_080--Hb_029262_010 Hb_003207_120 Hb_003207_120 Hb_006501_080--Hb_003207_120 Hb_105148_020 Hb_105148_020 Hb_006620_030--Hb_105148_020 Hb_001369_590 Hb_001369_590 Hb_006620_030--Hb_001369_590 Hb_006620_030--Hb_004308_030 Hb_002499_050 Hb_002499_050 Hb_006620_030--Hb_002499_050 Hb_129956_010 Hb_129956_010 Hb_006620_030--Hb_129956_010 Hb_023827_030 Hb_023827_030 Hb_016297_010--Hb_023827_030 Hb_023582_010 Hb_023582_010 Hb_016297_010--Hb_023582_010 Hb_000722_030 Hb_000722_030 Hb_016297_010--Hb_000722_030 Hb_019053_040 Hb_019053_040 Hb_016297_010--Hb_019053_040 Hb_001258_130 Hb_001258_130 Hb_016297_010--Hb_001258_130 Hb_016297_010--Hb_105148_020 Hb_005488_210 Hb_005488_210 Hb_007007_100--Hb_005488_210 Hb_000007_330 Hb_000007_330 Hb_007007_100--Hb_000007_330 Hb_007007_100--Hb_000890_170 Hb_000313_250 Hb_000313_250 Hb_007007_100--Hb_000313_250 Hb_000236_130 Hb_000236_130 Hb_007007_100--Hb_000236_130 Hb_007007_100--Hb_006620_030 Hb_000890_170--Hb_000236_130 Hb_000890_170--Hb_000313_250 Hb_000890_170--Hb_000007_330 Hb_001926_070 Hb_001926_070 Hb_000890_170--Hb_001926_070 Hb_001606_010 Hb_001606_010 Hb_000890_170--Hb_001606_010 Hb_000294_020 Hb_000294_020 Hb_000890_170--Hb_000294_020 Hb_027684_010--Hb_000722_030 Hb_001655_080 Hb_001655_080 Hb_027684_010--Hb_001655_080 Hb_002066_100 Hb_002066_100 Hb_027684_010--Hb_002066_100 Hb_002518_040 Hb_002518_040 Hb_027684_010--Hb_002518_040 Hb_021443_060 Hb_021443_060 Hb_027684_010--Hb_021443_060 Hb_000358_160 Hb_000358_160 Hb_027684_010--Hb_000358_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0331811 1.78647 13.9984 5.20623 0.0224922 0.253734
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.188785 5.79476

CAGE analysis