Hb_001689_070

Information

Type -
Description -
Location Contig1689: 126114-129231
Sequence    

Annotation

kegg
ID rcu:RCOM_1593840
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002510355.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q6Z6D6
description Cytochrome P450 734A2 OS=Oryza sativa subsp. japonica GN=CYP734A2 PE=2 SV=1
trembl
ID B9R7R2
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1593840 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 734a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15666: 126263-126956 , PASA_asmbl_15667: 126263-126741 , PASA_asmbl_15668: 127074-129127 , PASA_asmbl_15669: 127074-129127
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001689_070 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_002675_230 0.1207566731 - - PREDICTED: glutathione S-transferase L3-like [Populus euphratica]
3 Hb_005568_050 0.126853311 - - ascorbate peroxidase [Hevea brasiliensis]
4 Hb_000215_130 0.1318873755 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
5 Hb_006469_090 0.1384803472 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
6 Hb_000866_040 0.13982993 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
7 Hb_002893_190 0.1400112703 - - unnamed protein product [Coffea canephora]
8 Hb_003224_010 0.1428375799 - - -
9 Hb_004324_320 0.1442282543 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
10 Hb_002601_140 0.1449170789 - - signal transducer, putative [Ricinus communis]
11 Hb_012033_010 0.1450879807 - - PREDICTED: histone H1.2-like [Jatropha curcas]
12 Hb_000189_160 0.1470401754 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
13 Hb_170878_070 0.1527199066 - - hypothetical protein EUGRSUZ_L008133, partial [Eucalyptus grandis]
14 Hb_000042_380 0.1529669987 - - PREDICTED: uncharacterized membrane protein At3g27390 [Jatropha curcas]
15 Hb_004306_130 0.1576628664 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
16 Hb_002811_020 0.1600350042 - - Cysteine synthase [Morus notabilis]
17 Hb_001186_120 0.1606545907 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Jatropha curcas]
18 Hb_001675_270 0.1628984083 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]
19 Hb_000866_190 0.163305361 - - transcription factor, putative [Ricinus communis]
20 Hb_170023_010 0.1648344834 - - hypothetical protein EUGRSUZ_C03837 [Eucalyptus grandis]

Gene co-expression network

sample Hb_001689_070 Hb_001689_070 Hb_002675_230 Hb_002675_230 Hb_001689_070--Hb_002675_230 Hb_005568_050 Hb_005568_050 Hb_001689_070--Hb_005568_050 Hb_000215_130 Hb_000215_130 Hb_001689_070--Hb_000215_130 Hb_006469_090 Hb_006469_090 Hb_001689_070--Hb_006469_090 Hb_000866_040 Hb_000866_040 Hb_001689_070--Hb_000866_040 Hb_002893_190 Hb_002893_190 Hb_001689_070--Hb_002893_190 Hb_004306_130 Hb_004306_130 Hb_002675_230--Hb_004306_130 Hb_001244_050 Hb_001244_050 Hb_002675_230--Hb_001244_050 Hb_002675_230--Hb_000866_040 Hb_009102_010 Hb_009102_010 Hb_002675_230--Hb_009102_010 Hb_004324_320 Hb_004324_320 Hb_002675_230--Hb_004324_320 Hb_001675_270 Hb_001675_270 Hb_005568_050--Hb_001675_270 Hb_000760_080 Hb_000760_080 Hb_005568_050--Hb_000760_080 Hb_000042_380 Hb_000042_380 Hb_005568_050--Hb_000042_380 Hb_003607_140 Hb_003607_140 Hb_005568_050--Hb_003607_140 Hb_010174_180 Hb_010174_180 Hb_005568_050--Hb_010174_180 Hb_002316_020 Hb_002316_020 Hb_005568_050--Hb_002316_020 Hb_001186_120 Hb_001186_120 Hb_000215_130--Hb_001186_120 Hb_001226_100 Hb_001226_100 Hb_000215_130--Hb_001226_100 Hb_000336_280 Hb_000336_280 Hb_000215_130--Hb_000336_280 Hb_004709_030 Hb_004709_030 Hb_000215_130--Hb_004709_030 Hb_005333_210 Hb_005333_210 Hb_000215_130--Hb_005333_210 Hb_001832_110 Hb_001832_110 Hb_000215_130--Hb_001832_110 Hb_001439_010 Hb_001439_010 Hb_006469_090--Hb_001439_010 Hb_007850_110 Hb_007850_110 Hb_006469_090--Hb_007850_110 Hb_000866_190 Hb_000866_190 Hb_006469_090--Hb_000866_190 Hb_006469_090--Hb_003607_140 Hb_005663_090 Hb_005663_090 Hb_006469_090--Hb_005663_090 Hb_000680_070 Hb_000680_070 Hb_006469_090--Hb_000680_070 Hb_000866_040--Hb_004306_130 Hb_005993_030 Hb_005993_030 Hb_000866_040--Hb_005993_030 Hb_001135_010 Hb_001135_010 Hb_000866_040--Hb_001135_010 Hb_002918_120 Hb_002918_120 Hb_000866_040--Hb_002918_120 Hb_004446_060 Hb_004446_060 Hb_000866_040--Hb_004446_060 Hb_001500_080 Hb_001500_080 Hb_000866_040--Hb_001500_080 Hb_003106_110 Hb_003106_110 Hb_002893_190--Hb_003106_110 Hb_015306_010 Hb_015306_010 Hb_002893_190--Hb_015306_010 Hb_002893_190--Hb_006469_090 Hb_012033_010 Hb_012033_010 Hb_002893_190--Hb_012033_010 Hb_002811_020 Hb_002811_020 Hb_002893_190--Hb_002811_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.575276 5.00027 18.5219 8.19767 0.722343 0.817518
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.155372 0.529799 0.155452 17.551 17.9404

CAGE analysis