Hb_001691_040

Information

Type -
Description -
Location Contig1691: 93976-99896
Sequence    

Annotation

kegg
ID rcu:RCOM_1674860
description hypothetical protein
nr
ID XP_012091609.1
description PREDICTED: uncharacterized protein LOC105649546 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JAY8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21447 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15720: 94001-99840
cDNA
(Sanger)
(ID:Location)		 040_K02.ab1: 94001-94765

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001691_040 0.0 - - PREDICTED: uncharacterized protein LOC105649546 isoform X2 [Jatropha curcas]
2 Hb_003975_010 0.066843507 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]
3 Hb_002272_240 0.0728050693 - - catalytic, putative [Ricinus communis]
4 Hb_000912_100 0.081253803 - - PREDICTED: CMP-sialic acid transporter 3-like isoform X2 [Elaeis guineensis]
5 Hb_001754_020 0.0818545272 - - PREDICTED: kinesin-13A isoform X1 [Jatropha curcas]
6 Hb_000395_040 0.0910572666 - - PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
7 Hb_002876_210 0.0935805048 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Jatropha curcas]
8 Hb_003209_130 0.1000577574 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
9 Hb_017948_030 0.100229169 - - PREDICTED: uncharacterized protein LOC105639493 [Jatropha curcas]
10 Hb_023344_150 0.1007436535 - - PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]
11 Hb_013726_050 0.1016607427 - - PREDICTED: probable methyltransferase PMT13 [Jatropha curcas]
12 Hb_000258_420 0.1027271666 - - sucrose transporter 2A [Hevea brasiliensis]
13 Hb_003777_030 0.1060361103 - - Exocyst complex component, putative [Ricinus communis]
14 Hb_004375_110 0.1070604628 - - PREDICTED: probable ATP-dependent RNA helicase DHX37 [Jatropha curcas]
15 Hb_005192_010 0.1093899307 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
16 Hb_007919_110 0.110953277 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
17 Hb_005977_100 0.1120351725 - - PREDICTED: tetraspanin-18 [Jatropha curcas]
18 Hb_003777_130 0.112465555 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
19 Hb_010672_020 0.1134712704 - - PREDICTED: ATP synthase gamma chain, chloroplastic-like [Jatropha curcas]
20 Hb_007545_010 0.1138011832 - - HIV-1 rev binding protein, hrbl, putative [Ricinus communis]

Gene co-expression network

sample Hb_001691_040 Hb_001691_040 Hb_003975_010 Hb_003975_010 Hb_001691_040--Hb_003975_010 Hb_002272_240 Hb_002272_240 Hb_001691_040--Hb_002272_240 Hb_000912_100 Hb_000912_100 Hb_001691_040--Hb_000912_100 Hb_001754_020 Hb_001754_020 Hb_001691_040--Hb_001754_020 Hb_000395_040 Hb_000395_040 Hb_001691_040--Hb_000395_040 Hb_002876_210 Hb_002876_210 Hb_001691_040--Hb_002876_210 Hb_005192_010 Hb_005192_010 Hb_003975_010--Hb_005192_010 Hb_003975_010--Hb_001754_020 Hb_003975_010--Hb_000912_100 Hb_002046_060 Hb_002046_060 Hb_003975_010--Hb_002046_060 Hb_009252_030 Hb_009252_030 Hb_003975_010--Hb_009252_030 Hb_013726_050 Hb_013726_050 Hb_002272_240--Hb_013726_050 Hb_007919_110 Hb_007919_110 Hb_002272_240--Hb_007919_110 Hb_006120_050 Hb_006120_050 Hb_002272_240--Hb_006120_050 Hb_002304_050 Hb_002304_050 Hb_002272_240--Hb_002304_050 Hb_002272_240--Hb_001754_020 Hb_002217_090 Hb_002217_090 Hb_000912_100--Hb_002217_090 Hb_000417_300 Hb_000417_300 Hb_000912_100--Hb_000417_300 Hb_000912_100--Hb_002046_060 Hb_000912_100--Hb_002876_210 Hb_021576_070 Hb_021576_070 Hb_001754_020--Hb_021576_070 Hb_010672_020 Hb_010672_020 Hb_001754_020--Hb_010672_020 Hb_116349_120 Hb_116349_120 Hb_001754_020--Hb_116349_120 Hb_005535_080 Hb_005535_080 Hb_000395_040--Hb_005535_080 Hb_000815_240 Hb_000815_240 Hb_000395_040--Hb_000815_240 Hb_005381_020 Hb_005381_020 Hb_000395_040--Hb_005381_020 Hb_000523_030 Hb_000523_030 Hb_000395_040--Hb_000523_030 Hb_000890_030 Hb_000890_030 Hb_000395_040--Hb_000890_030 Hb_002965_050 Hb_002965_050 Hb_002876_210--Hb_002965_050 Hb_002900_120 Hb_002900_120 Hb_002876_210--Hb_002900_120 Hb_000711_010 Hb_000711_010 Hb_002876_210--Hb_000711_010 Hb_000815_310 Hb_000815_310 Hb_002876_210--Hb_000815_310 Hb_000452_030 Hb_000452_030 Hb_002876_210--Hb_000452_030 Hb_002876_210--Hb_002217_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.93463 18.7476 16.0374 29.4819 5.72527 6.18482
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.03351 8.53508 8.68485 7.68772 15.0989

CAGE analysis