Hb_001691_220

Information

Type -
Description -
Location Contig1691: 279561-281626
Sequence    

Annotation

kegg
ID rcu:RCOM_0936350
description hypothetical protein
nr
ID XP_012091598.1
description PREDICTED: uncharacterized protein LOC105649537 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JN68
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21435 PE=4 SV=1
Gene Ontology
ID GO:0016021
description dna ligase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001691_220 0.0 - - PREDICTED: uncharacterized protein LOC105649537 [Jatropha curcas]
2 Hb_027242_010 0.1924720736 - - PREDICTED: pathogenesis-related protein 1-like [Populus euphratica]
3 Hb_001579_290 0.1994670405 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
4 Hb_002081_220 0.2105802123 - - PREDICTED: uncharacterized protein LOC103707552 [Phoenix dactylifera]
5 Hb_000086_720 0.2133560863 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
6 Hb_187211_010 0.2158219829 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
7 Hb_001377_480 0.2168915602 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
8 Hb_003480_010 0.2172207886 - - cytochrome P450 family protein [Populus trichocarpa]
9 Hb_011930_170 0.2206701498 - - glutathione s-transferase, putative [Ricinus communis]
10 Hb_000161_230 0.2218742385 - - lactoylglutathione lyase, putative [Ricinus communis]
11 Hb_001158_110 0.2242071008 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
12 Hb_010053_010 0.2242141357 - - hypothetical protein POPTR_0515s00220g [Populus trichocarpa]
13 Hb_006788_010 0.2248068338 - - PREDICTED: calcium-transporting ATPase 12, plasma membrane-type [Jatropha curcas]
14 Hb_000815_280 0.2284804357 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
15 Hb_021888_010 0.2302059335 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
16 Hb_001102_060 0.236801913 - - PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 isoform X1 [Jatropha curcas]
17 Hb_178252_010 0.2372716441 - - hypothetical protein POPTR_0018s01890g [Populus trichocarpa]
18 Hb_000101_370 0.2378624687 - - PREDICTED: dihydrofolate reductase-like isoform X1 [Jatropha curcas]
19 Hb_000057_210 0.2383894287 - - hypothetical protein JCGZ_06274 [Jatropha curcas]
20 Hb_002603_030 0.2385172701 - - Nodulation receptor kinase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001691_220 Hb_001691_220 Hb_027242_010 Hb_027242_010 Hb_001691_220--Hb_027242_010 Hb_001579_290 Hb_001579_290 Hb_001691_220--Hb_001579_290 Hb_002081_220 Hb_002081_220 Hb_001691_220--Hb_002081_220 Hb_000086_720 Hb_000086_720 Hb_001691_220--Hb_000086_720 Hb_187211_010 Hb_187211_010 Hb_001691_220--Hb_187211_010 Hb_001377_480 Hb_001377_480 Hb_001691_220--Hb_001377_480 Hb_003480_010 Hb_003480_010 Hb_027242_010--Hb_003480_010 Hb_001102_060 Hb_001102_060 Hb_027242_010--Hb_001102_060 Hb_178252_010 Hb_178252_010 Hb_027242_010--Hb_178252_010 Hb_000101_370 Hb_000101_370 Hb_027242_010--Hb_000101_370 Hb_000057_210 Hb_000057_210 Hb_027242_010--Hb_000057_210 Hb_069151_010 Hb_069151_010 Hb_027242_010--Hb_069151_010 Hb_001691_030 Hb_001691_030 Hb_001579_290--Hb_001691_030 Hb_002849_090 Hb_002849_090 Hb_001579_290--Hb_002849_090 Hb_002603_030 Hb_002603_030 Hb_001579_290--Hb_002603_030 Hb_000085_290 Hb_000085_290 Hb_001579_290--Hb_000085_290 Hb_001268_330 Hb_001268_330 Hb_001579_290--Hb_001268_330 Hb_010053_010 Hb_010053_010 Hb_002081_220--Hb_010053_010 Hb_164300_010 Hb_164300_010 Hb_002081_220--Hb_164300_010 Hb_021888_010 Hb_021888_010 Hb_002081_220--Hb_021888_010 Hb_001532_060 Hb_001532_060 Hb_002081_220--Hb_001532_060 Hb_002081_220--Hb_000101_370 Hb_001158_110 Hb_001158_110 Hb_002081_220--Hb_001158_110 Hb_000086_720--Hb_001158_110 Hb_001288_020 Hb_001288_020 Hb_000086_720--Hb_001288_020 Hb_000187_110 Hb_000187_110 Hb_000086_720--Hb_000187_110 Hb_001002_090 Hb_001002_090 Hb_000086_720--Hb_001002_090 Hb_000086_720--Hb_021888_010 Hb_010598_010 Hb_010598_010 Hb_000086_720--Hb_010598_010 Hb_187211_010--Hb_001377_480 Hb_001789_010 Hb_001789_010 Hb_187211_010--Hb_001789_010 Hb_001101_020 Hb_001101_020 Hb_187211_010--Hb_001101_020 Hb_111985_120 Hb_111985_120 Hb_187211_010--Hb_111985_120 Hb_000625_130 Hb_000625_130 Hb_187211_010--Hb_000625_130 Hb_142522_030 Hb_142522_030 Hb_187211_010--Hb_142522_030 Hb_001377_480--Hb_111985_120 Hb_001377_480--Hb_000625_130 Hb_001377_480--Hb_001789_010 Hb_001377_480--Hb_001101_020 Hb_001377_480--Hb_142522_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0984587 1.71912 0.716471 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.128575 0.101103 0.183487 2.75887 0

CAGE analysis