Hb_001693_030

Information

Type -
Description -
Location Contig1693: 20355-21992
Sequence    

Annotation

kegg
ID rcu:RCOM_0354590
description d-lactate dehydrogenase, putative (EC:1.21.3.3)
nr
ID XP_012069233.1
description PREDICTED: reticuline oxidase-like [Jatropha curcas]
swissprot
ID P30986
description Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1
trembl
ID A0A067L097
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24647 PE=4 SV=1
Gene Ontology
ID GO:0008762
description reticuline oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001693_030 0.0 - - PREDICTED: reticuline oxidase-like [Jatropha curcas]
2 Hb_000499_050 0.0406808581 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_000592_040 0.044096145 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000426_070 0.0444744727 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
5 Hb_117335_020 0.0457505963 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
6 Hb_000994_090 0.0467746483 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
7 Hb_002851_050 0.0507480236 transcription factor TF Family: MYB-related myb family transcription factor family protein [Populus trichocarpa]
8 Hb_000426_060 0.0565173877 - - hypothetical protein CISIN_1g048192mg, partial [Citrus sinensis]
9 Hb_023675_020 0.0568265253 - - acc synthase, putative [Ricinus communis]
10 Hb_000103_280 0.0763442689 transcription factor TF Family: HSF Heat shock factor protein HSF30, putative [Ricinus communis]
11 Hb_001405_180 0.0765397885 - - zinc finger protein, putative [Ricinus communis]
12 Hb_039757_010 0.0799375249 - - -
13 Hb_010615_010 0.080916848 - - PREDICTED: reticuline oxidase-like protein [Jatropha curcas]
14 Hb_001784_010 0.0857377966 - - nutrient reservoir, putative [Ricinus communis]
15 Hb_008296_010 0.0870504865 - - -
16 Hb_009230_050 0.0918649719 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
17 Hb_013862_010 0.1033376001 - - PREDICTED: uncharacterized protein LOC105650642 [Jatropha curcas]
18 Hb_010368_040 0.1045800905 - - conserved hypothetical protein [Ricinus communis]
19 Hb_070850_010 0.111854873 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B-like [Jatropha curcas]
20 Hb_007556_010 0.11280875 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_001693_030 Hb_001693_030 Hb_000499_050 Hb_000499_050 Hb_001693_030--Hb_000499_050 Hb_000592_040 Hb_000592_040 Hb_001693_030--Hb_000592_040 Hb_000426_070 Hb_000426_070 Hb_001693_030--Hb_000426_070 Hb_117335_020 Hb_117335_020 Hb_001693_030--Hb_117335_020 Hb_000994_090 Hb_000994_090 Hb_001693_030--Hb_000994_090 Hb_002851_050 Hb_002851_050 Hb_001693_030--Hb_002851_050 Hb_000499_050--Hb_000592_040 Hb_000499_050--Hb_000426_070 Hb_000499_050--Hb_000994_090 Hb_000499_050--Hb_002851_050 Hb_000426_060 Hb_000426_060 Hb_000499_050--Hb_000426_060 Hb_000499_050--Hb_117335_020 Hb_000592_040--Hb_000426_070 Hb_000592_040--Hb_000994_090 Hb_000592_040--Hb_002851_050 Hb_000592_040--Hb_000426_060 Hb_000592_040--Hb_117335_020 Hb_000426_070--Hb_000994_090 Hb_000426_070--Hb_002851_050 Hb_000426_070--Hb_000426_060 Hb_000426_070--Hb_117335_020 Hb_023675_020 Hb_023675_020 Hb_117335_020--Hb_023675_020 Hb_000103_280 Hb_000103_280 Hb_117335_020--Hb_000103_280 Hb_000994_090--Hb_002851_050 Hb_000994_090--Hb_000426_060 Hb_001405_180 Hb_001405_180 Hb_000994_090--Hb_001405_180 Hb_002851_050--Hb_000426_060 Hb_002851_050--Hb_001405_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.39289 0 0.40994 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00885791 0

CAGE analysis