Hb_001699_020

Information

Type -
Description -
Location Contig1699: 26308-30108
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_010097958.1
description hypothetical protein L484_026849 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RGK9
description Uncharacterized protein OS=Morus notabilis GN=L484_026849 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001699_020 0.0 - - hypothetical protein L484_026849 [Morus notabilis]
2 Hb_002876_100 0.0864738407 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
3 Hb_003462_170 0.1207361216 - - unnamed protein product [Vitis vinifera]
4 Hb_007632_140 0.1355774686 - - -
5 Hb_027654_010 0.1376705151 - - Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
6 Hb_019135_010 0.138137071 - - -
7 Hb_015817_010 0.1381555503 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
8 Hb_006455_020 0.141248746 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
9 Hb_000362_100 0.1419470996 - - -
10 Hb_000476_030 0.1421113152 - - PREDICTED: uncharacterized protein LOC105629366 [Jatropha curcas]
11 Hb_005029_030 0.1506474363 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
12 Hb_005021_040 0.150987185 - - PREDICTED: uncharacterized protein LOC103848240 [Brassica rapa]
13 Hb_002121_070 0.1515105103 - - conserved hypothetical protein [Ricinus communis]
14 Hb_011987_010 0.1524226166 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
15 Hb_106274_010 0.1570042849 - - hypothetical protein VITISV_008825 [Vitis vinifera]
16 Hb_170878_020 0.1579434152 - - -
17 Hb_000907_130 0.1603510509 - - -
18 Hb_043935_010 0.1615717452 - - Receptor protein kinase-like protein [Medicago truncatula]
19 Hb_002835_050 0.1666516148 - - PREDICTED: high-affinity nitrate transporter 3.1-like [Jatropha curcas]
20 Hb_001231_020 0.168492581 - - -

Gene co-expression network

sample Hb_001699_020 Hb_001699_020 Hb_002876_100 Hb_002876_100 Hb_001699_020--Hb_002876_100 Hb_003462_170 Hb_003462_170 Hb_001699_020--Hb_003462_170 Hb_007632_140 Hb_007632_140 Hb_001699_020--Hb_007632_140 Hb_027654_010 Hb_027654_010 Hb_001699_020--Hb_027654_010 Hb_019135_010 Hb_019135_010 Hb_001699_020--Hb_019135_010 Hb_015817_010 Hb_015817_010 Hb_001699_020--Hb_015817_010 Hb_002121_070 Hb_002121_070 Hb_002876_100--Hb_002121_070 Hb_005714_120 Hb_005714_120 Hb_002876_100--Hb_005714_120 Hb_000362_100 Hb_000362_100 Hb_002876_100--Hb_000362_100 Hb_005021_040 Hb_005021_040 Hb_002876_100--Hb_005021_040 Hb_036731_010 Hb_036731_010 Hb_002876_100--Hb_036731_010 Hb_005843_060 Hb_005843_060 Hb_003462_170--Hb_005843_060 Hb_125116_020 Hb_125116_020 Hb_003462_170--Hb_125116_020 Hb_006455_020 Hb_006455_020 Hb_003462_170--Hb_006455_020 Hb_001981_020 Hb_001981_020 Hb_003462_170--Hb_001981_020 Hb_000644_020 Hb_000644_020 Hb_003462_170--Hb_000644_020 Hb_007632_140--Hb_019135_010 Hb_007632_140--Hb_000362_100 Hb_007632_140--Hb_002121_070 Hb_007632_140--Hb_005714_120 Hb_106274_010 Hb_106274_010 Hb_007632_140--Hb_106274_010 Hb_007632_140--Hb_005021_040 Hb_027654_010--Hb_015817_010 Hb_043935_010 Hb_043935_010 Hb_027654_010--Hb_043935_010 Hb_010381_080 Hb_010381_080 Hb_027654_010--Hb_010381_080 Hb_006147_020 Hb_006147_020 Hb_027654_010--Hb_006147_020 Hb_004392_030 Hb_004392_030 Hb_027654_010--Hb_004392_030 Hb_019135_010--Hb_000362_100 Hb_019135_010--Hb_002121_070 Hb_019135_010--Hb_106274_010 Hb_000367_150 Hb_000367_150 Hb_019135_010--Hb_000367_150 Hb_001231_020 Hb_001231_020 Hb_019135_010--Hb_001231_020 Hb_015817_010--Hb_043935_010 Hb_080791_010 Hb_080791_010 Hb_015817_010--Hb_080791_010 Hb_015817_010--Hb_006147_020 Hb_005029_030 Hb_005029_030 Hb_015817_010--Hb_005029_030 Hb_000026_060 Hb_000026_060 Hb_015817_010--Hb_000026_060 Hb_004459_050 Hb_004459_050 Hb_015817_010--Hb_004459_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.104747 0.0290207 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.146563 0.597604

CAGE analysis