Hb_001718_030

Information

Type -
Description -
Location Contig1718: 62173-67957
Sequence    

Annotation

kegg
ID vvi:100260894
description CBL01; calcineurin B-like protein 01
nr
ID XP_012081016.1
description PREDICTED: calcineurin B-like protein 9 isoform X1 [Jatropha curcas]
swissprot
ID Q9LTB8
description Calcineurin B-like protein 9 OS=Arabidopsis thaliana GN=CBL9 PE=1 SV=3
trembl
ID A0A067K5Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17136 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calcineurin b-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16090: 62126-67918
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001718_030 0.0 - - PREDICTED: calcineurin B-like protein 9 isoform X1 [Jatropha curcas]
2 Hb_001188_030 0.0401760486 - - PREDICTED: proteasome subunit beta type-4-like [Jatropha curcas]
3 Hb_006355_040 0.0605809403 - - PREDICTED: chaperonin CPN60-2, mitochondrial-like [Jatropha curcas]
4 Hb_002060_010 0.0725369609 - - PREDICTED: uncharacterized protein LOC105642435 isoform X1 [Jatropha curcas]
5 Hb_001431_080 0.0783415146 - - 40S ribosomal protein S11, putative [Ricinus communis]
6 Hb_000676_390 0.0793366992 - - PREDICTED: protein FMP32, mitochondrial [Jatropha curcas]
7 Hb_006326_040 0.0812737853 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001931_010 0.0869298281 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
9 Hb_000676_310 0.0881422423 - - BnaC09g40680D [Brassica napus]
10 Hb_005843_140 0.0890303481 - - Red chlorophyll catabolite reductase, chloroplast precursor, putative [Ricinus communis]
11 Hb_002811_170 0.0891277117 - - PREDICTED: 40S ribosomal protein S3a-1 [Jatropha curcas]
12 Hb_000571_020 0.0902647403 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]
13 Hb_006198_070 0.0932242558 - - pantoate-beta-alanine ligase, putative [Ricinus communis]
14 Hb_015299_030 0.0932394755 - - PREDICTED: proteasome subunit alpha type-7 [Jatropha curcas]
15 Hb_006256_030 0.093381661 - - PREDICTED: putative cyclic nucleotide-gated ion channel 18 [Jatropha curcas]
16 Hb_000731_190 0.0940680034 - - PREDICTED: cardiolipin synthase (CMP-forming), mitochondrial [Jatropha curcas]
17 Hb_011236_010 0.0946009034 - - hypothetical protein JCGZ_17006 [Jatropha curcas]
18 Hb_008071_020 0.0947826659 - - PREDICTED: serine/threonine-protein kinase AFC1 [Jatropha curcas]
19 Hb_001053_140 0.0964604856 - - PREDICTED: ATP synthase subunit O, mitochondrial [Jatropha curcas]
20 Hb_005269_080 0.0967197577 - - protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_001718_030 Hb_001718_030 Hb_001188_030 Hb_001188_030 Hb_001718_030--Hb_001188_030 Hb_006355_040 Hb_006355_040 Hb_001718_030--Hb_006355_040 Hb_002060_010 Hb_002060_010 Hb_001718_030--Hb_002060_010 Hb_001431_080 Hb_001431_080 Hb_001718_030--Hb_001431_080 Hb_000676_390 Hb_000676_390 Hb_001718_030--Hb_000676_390 Hb_006326_040 Hb_006326_040 Hb_001718_030--Hb_006326_040 Hb_001188_030--Hb_000676_390 Hb_001188_030--Hb_001431_080 Hb_001188_030--Hb_006355_040 Hb_015299_030 Hb_015299_030 Hb_001188_030--Hb_015299_030 Hb_001931_010 Hb_001931_010 Hb_001188_030--Hb_001931_010 Hb_005843_140 Hb_005843_140 Hb_006355_040--Hb_005843_140 Hb_002968_040 Hb_002968_040 Hb_006355_040--Hb_002968_040 Hb_003669_020 Hb_003669_020 Hb_006355_040--Hb_003669_020 Hb_006198_070 Hb_006198_070 Hb_006355_040--Hb_006198_070 Hb_002060_010--Hb_001188_030 Hb_006256_030 Hb_006256_030 Hb_002060_010--Hb_006256_030 Hb_098315_020 Hb_098315_020 Hb_002060_010--Hb_098315_020 Hb_002060_010--Hb_006355_040 Hb_000327_380 Hb_000327_380 Hb_002060_010--Hb_000327_380 Hb_001431_080--Hb_015299_030 Hb_132840_140 Hb_132840_140 Hb_001431_080--Hb_132840_140 Hb_000676_310 Hb_000676_310 Hb_001431_080--Hb_000676_310 Hb_001431_080--Hb_000676_390 Hb_008071_020 Hb_008071_020 Hb_000676_390--Hb_008071_020 Hb_004889_020 Hb_004889_020 Hb_000676_390--Hb_004889_020 Hb_026889_030 Hb_026889_030 Hb_000676_390--Hb_026889_030 Hb_000676_390--Hb_001931_010 Hb_002540_080 Hb_002540_080 Hb_000676_390--Hb_002540_080 Hb_006326_040--Hb_001931_010 Hb_006326_040--Hb_008071_020 Hb_006326_040--Hb_004889_020 Hb_000505_130 Hb_000505_130 Hb_006326_040--Hb_000505_130 Hb_000566_120 Hb_000566_120 Hb_006326_040--Hb_000566_120 Hb_028396_010 Hb_028396_010 Hb_006326_040--Hb_028396_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.8655 14.0755 27.7924 28.7763 10.7713 12.2687
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.5791 63.7774 29.3856 18.1758 15.4686

CAGE analysis