Hb_001723_080

Information

Type -
Description -
Location Contig1723: 91472-93160
Sequence    

Annotation

kegg
ID mtr:MTR_2g032700
description hypothetical protein
nr
ID XP_010098758.1
description hypothetical protein L484_026139 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9R840
description Uncharacterized protein OS=Morus notabilis GN=L484_026139 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001723_080 0.0 - - hypothetical protein L484_026139 [Morus notabilis]
2 Hb_000454_110 0.0942991965 - - PREDICTED: polyprenol reductase 2-like isoform X3 [Populus euphratica]
3 Hb_001012_040 0.1183187746 - - PREDICTED: MADS-box transcription factor 23-like isoform X2 [Jatropha curcas]
4 Hb_000300_400 0.1292935695 - - hypothetical protein PHAVU_001G114100g [Phaseolus vulgaris]
5 Hb_008705_090 0.1323850432 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2-like [Jatropha curcas]
6 Hb_012395_200 0.1344269936 - - conserved hypothetical protein [Ricinus communis]
7 Hb_012395_210 0.1381618595 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000684_160 0.1426734792 - - PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Jatropha curcas]
9 Hb_005539_210 0.1426762942 - - -
10 Hb_103752_010 0.1445438132 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
11 Hb_000603_210 0.1455355586 - - hypothetical protein POPTR_0006s23660g [Populus trichocarpa]
12 Hb_003349_070 0.1457239801 - - PREDICTED: signal recognition particle 14 kDa protein [Gossypium raimondii]
13 Hb_004474_010 0.1457917174 - - unnamed protein product [Coffea canephora]
14 Hb_008699_040 0.1467091423 - - -
15 Hb_080477_060 0.1503037446 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000078_010 0.1503813295 - - hypothetical protein POPTR_0006s06510g, partial [Populus trichocarpa]
17 Hb_003777_230 0.1509014903 - - PREDICTED: abscisic stress-ripening protein 1-like [Citrus sinensis]
18 Hb_000039_170 0.1515817254 - - protein MOTHER of FT and TF 1-like [Jatropha curcas]
19 Hb_178968_170 0.1540988032 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Jatropha curcas]
20 Hb_001473_120 0.1563575382 - - Uncharacterized protein isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_001723_080 Hb_001723_080 Hb_000454_110 Hb_000454_110 Hb_001723_080--Hb_000454_110 Hb_001012_040 Hb_001012_040 Hb_001723_080--Hb_001012_040 Hb_000300_400 Hb_000300_400 Hb_001723_080--Hb_000300_400 Hb_008705_090 Hb_008705_090 Hb_001723_080--Hb_008705_090 Hb_012395_200 Hb_012395_200 Hb_001723_080--Hb_012395_200 Hb_012395_210 Hb_012395_210 Hb_001723_080--Hb_012395_210 Hb_000454_110--Hb_001012_040 Hb_103752_010 Hb_103752_010 Hb_000454_110--Hb_103752_010 Hb_149683_010 Hb_149683_010 Hb_000454_110--Hb_149683_010 Hb_000039_170 Hb_000039_170 Hb_000454_110--Hb_000039_170 Hb_000454_110--Hb_012395_200 Hb_001012_040--Hb_012395_210 Hb_004206_030 Hb_004206_030 Hb_001012_040--Hb_004206_030 Hb_005539_210 Hb_005539_210 Hb_001012_040--Hb_005539_210 Hb_001213_120 Hb_001213_120 Hb_001012_040--Hb_001213_120 Hb_000603_210 Hb_000603_210 Hb_000300_400--Hb_000603_210 Hb_000300_400--Hb_005539_210 Hb_000300_400--Hb_149683_010 Hb_006816_440 Hb_006816_440 Hb_000300_400--Hb_006816_440 Hb_002235_230 Hb_002235_230 Hb_000300_400--Hb_002235_230 Hb_001007_050 Hb_001007_050 Hb_008705_090--Hb_001007_050 Hb_002260_020 Hb_002260_020 Hb_008705_090--Hb_002260_020 Hb_003777_230 Hb_003777_230 Hb_008705_090--Hb_003777_230 Hb_010172_100 Hb_010172_100 Hb_008705_090--Hb_010172_100 Hb_008705_090--Hb_000454_110 Hb_000684_160 Hb_000684_160 Hb_012395_200--Hb_000684_160 Hb_001008_010 Hb_001008_010 Hb_012395_200--Hb_001008_010 Hb_000078_010 Hb_000078_010 Hb_012395_200--Hb_000078_010 Hb_007810_030 Hb_007810_030 Hb_012395_200--Hb_007810_030 Hb_074590_010 Hb_074590_010 Hb_012395_200--Hb_074590_010 Hb_004297_040 Hb_004297_040 Hb_012395_210--Hb_004297_040 Hb_012395_210--Hb_000078_010 Hb_012395_210--Hb_001213_120 Hb_000367_280 Hb_000367_280 Hb_012395_210--Hb_000367_280 Hb_001102_250 Hb_001102_250 Hb_012395_210--Hb_001102_250 Hb_012395_210--Hb_005539_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.41507 0.368601 0 0.226796 1.19816 3.96351
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.2701 8.9642 4.70888 0.935012 0

CAGE analysis