Hb_001723_150

Information

Type -
Description -
Location Contig1723: 155775-158542
Sequence    

Annotation

kegg
ID rcu:RCOM_1002920
description S-adenosylmethionine-dependent methyltransferase, putative
nr
ID XP_002519302.1
description S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
swissprot
ID Q10711
description Endothelin-converting enzyme 2 OS=Bos taurus GN=ECE2 PE=1 SV=2
trembl
ID B9RZY3
description S-adenosylmethionine-dependent methyltransferase, putative OS=Ricinus communis GN=RCOM_1002920 PE=4 SV=1
Gene Ontology
ID GO:0016740
description methyltransferase-like protein 13

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16278: 155767-158345
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001723_150 0.0 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
2 Hb_003213_010 0.0616914314 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
3 Hb_000173_310 0.0639969416 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
4 Hb_000300_260 0.0719495031 - - PREDICTED: replication factor C subunit 3 [Jatropha curcas]
5 Hb_002272_050 0.0738477523 - - microsomal signal peptidase 23 kD subunit, putative [Ricinus communis]
6 Hb_003861_060 0.0747223515 - - PREDICTED: treacle protein [Jatropha curcas]
7 Hb_018790_020 0.0789973265 - - protein kinase, putative [Ricinus communis]
8 Hb_000028_520 0.0792564796 - - hypothetical protein L484_025125 [Morus notabilis]
9 Hb_043792_010 0.082414663 - - PREDICTED: uncharacterized protein LOC105645113 isoform X2 [Jatropha curcas]
10 Hb_171900_090 0.0830768656 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000359_040 0.0834495958 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004312_010 0.0848110568 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X2 [Jatropha curcas]
13 Hb_001761_120 0.0863112002 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
14 Hb_000789_320 0.0881636587 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
15 Hb_010931_070 0.0883712432 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Jatropha curcas]
16 Hb_000144_070 0.0883997147 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004109_320 0.0884837872 - - PREDICTED: vacuolar protein sorting-associated protein 52 A [Jatropha curcas]
18 Hb_001025_120 0.0886320231 transcription factor TF Family: Jumonji PREDICTED: jmjC domain-containing protein 4 [Jatropha curcas]
19 Hb_002716_060 0.088775115 - - carboxylesterase np, putative [Ricinus communis]
20 Hb_002572_020 0.0898828688 transcription factor TF Family: SBP hypothetical protein POPTR_0005s28010g [Populus trichocarpa]

Gene co-expression network

sample Hb_001723_150 Hb_001723_150 Hb_003213_010 Hb_003213_010 Hb_001723_150--Hb_003213_010 Hb_000173_310 Hb_000173_310 Hb_001723_150--Hb_000173_310 Hb_000300_260 Hb_000300_260 Hb_001723_150--Hb_000300_260 Hb_002272_050 Hb_002272_050 Hb_001723_150--Hb_002272_050 Hb_003861_060 Hb_003861_060 Hb_001723_150--Hb_003861_060 Hb_018790_020 Hb_018790_020 Hb_001723_150--Hb_018790_020 Hb_003213_010--Hb_000173_310 Hb_003213_010--Hb_000300_260 Hb_000649_230 Hb_000649_230 Hb_003213_010--Hb_000649_230 Hb_004312_010 Hb_004312_010 Hb_003213_010--Hb_004312_010 Hb_003213_010--Hb_002272_050 Hb_000173_310--Hb_000300_260 Hb_000173_310--Hb_004312_010 Hb_002572_020 Hb_002572_020 Hb_000173_310--Hb_002572_020 Hb_002413_010 Hb_002413_010 Hb_000173_310--Hb_002413_010 Hb_000300_260--Hb_004312_010 Hb_012565_070 Hb_012565_070 Hb_000300_260--Hb_012565_070 Hb_000086_170 Hb_000086_170 Hb_000300_260--Hb_000086_170 Hb_000875_080 Hb_000875_080 Hb_002272_050--Hb_000875_080 Hb_171900_090 Hb_171900_090 Hb_002272_050--Hb_171900_090 Hb_000336_210 Hb_000336_210 Hb_002272_050--Hb_000336_210 Hb_000359_040 Hb_000359_040 Hb_002272_050--Hb_000359_040 Hb_005271_040 Hb_005271_040 Hb_002272_050--Hb_005271_040 Hb_000297_160 Hb_000297_160 Hb_002272_050--Hb_000297_160 Hb_014834_150 Hb_014834_150 Hb_003861_060--Hb_014834_150 Hb_004052_080 Hb_004052_080 Hb_003861_060--Hb_004052_080 Hb_003428_010 Hb_003428_010 Hb_003861_060--Hb_003428_010 Hb_003513_010 Hb_003513_010 Hb_003861_060--Hb_003513_010 Hb_164390_010 Hb_164390_010 Hb_003861_060--Hb_164390_010 Hb_000392_420 Hb_000392_420 Hb_003861_060--Hb_000392_420 Hb_001025_120 Hb_001025_120 Hb_018790_020--Hb_001025_120 Hb_007894_150 Hb_007894_150 Hb_018790_020--Hb_007894_150 Hb_000028_520 Hb_000028_520 Hb_018790_020--Hb_000028_520 Hb_002716_060 Hb_002716_060 Hb_018790_020--Hb_002716_060 Hb_000365_230 Hb_000365_230 Hb_018790_020--Hb_000365_230 Hb_004109_320 Hb_004109_320 Hb_018790_020--Hb_004109_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.89565 8.43126 17.311 12.0831 7.78021 5.47605
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.17222 8.71327 8.09065 7.47813 7.29062

CAGE analysis