Hb_001749_030

Information

Type -
Description -
Location Contig1749: 57921-59346
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID K7MKW6
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001749_030 0.0 - - -
2 Hb_017524_010 0.2291882549 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
3 Hb_000659_020 0.2325507227 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
4 Hb_001373_020 0.2497043216 - - -
5 Hb_141142_010 0.2501963727 - - hypothetical protein JCGZ_21320 [Jatropha curcas]
6 Hb_133508_010 0.2588367536 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.3-like [Jatropha curcas]
7 Hb_170516_010 0.2589799617 - - hypothetical protein MTR_001s0023 [Medicago truncatula]
8 Hb_007137_030 0.2658246367 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.3-like [Jatropha curcas]
9 Hb_002553_160 0.2712299072 - - PREDICTED: uncharacterized protein LOC104590935 [Nelumbo nucifera]
10 Hb_000111_220 0.2791224002 - - unnamed protein product [Vitis vinifera]
11 Hb_000000_140 0.2800122615 - - -
12 Hb_005000_200 0.2815618917 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
13 Hb_001608_030 0.2830337927 - - Protein NSP-INTERACTING KINASE 1 [Glycine soja]
14 Hb_000007_160 0.2844030235 - - hypothetical protein POPTR_0008s10970g [Populus trichocarpa]
15 Hb_151671_010 0.284946025 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]
16 Hb_000656_180 0.2884423193 - - PREDICTED: uncharacterized protein LOC105631371 [Jatropha curcas]
17 Hb_115158_010 0.2893151897 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
18 Hb_001907_130 0.2902352146 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
19 Hb_000017_150 0.2921988817 - - hypothetical protein POPTR_0001s09780g [Populus trichocarpa]
20 Hb_000844_010 0.2946344582 - - PREDICTED: lysine histidine transporter-like 8 [Jatropha curcas]

Gene co-expression network

sample Hb_001749_030 Hb_001749_030 Hb_017524_010 Hb_017524_010 Hb_001749_030--Hb_017524_010 Hb_000659_020 Hb_000659_020 Hb_001749_030--Hb_000659_020 Hb_001373_020 Hb_001373_020 Hb_001749_030--Hb_001373_020 Hb_141142_010 Hb_141142_010 Hb_001749_030--Hb_141142_010 Hb_133508_010 Hb_133508_010 Hb_001749_030--Hb_133508_010 Hb_170516_010 Hb_170516_010 Hb_001749_030--Hb_170516_010 Hb_000465_360 Hb_000465_360 Hb_017524_010--Hb_000465_360 Hb_124302_030 Hb_124302_030 Hb_017524_010--Hb_124302_030 Hb_069232_010 Hb_069232_010 Hb_017524_010--Hb_069232_010 Hb_000844_010 Hb_000844_010 Hb_017524_010--Hb_000844_010 Hb_017417_020 Hb_017417_020 Hb_017524_010--Hb_017417_020 Hb_007137_030 Hb_007137_030 Hb_000659_020--Hb_007137_030 Hb_003226_080 Hb_003226_080 Hb_000659_020--Hb_003226_080 Hb_001079_030 Hb_001079_030 Hb_000659_020--Hb_001079_030 Hb_093177_010 Hb_093177_010 Hb_000659_020--Hb_093177_010 Hb_001514_060 Hb_001514_060 Hb_000659_020--Hb_001514_060 Hb_008246_090 Hb_008246_090 Hb_000659_020--Hb_008246_090 Hb_002553_160 Hb_002553_160 Hb_001373_020--Hb_002553_160 Hb_011861_110 Hb_011861_110 Hb_001373_020--Hb_011861_110 Hb_007773_030 Hb_007773_030 Hb_001373_020--Hb_007773_030 Hb_006615_040 Hb_006615_040 Hb_001373_020--Hb_006615_040 Hb_001584_010 Hb_001584_010 Hb_001373_020--Hb_001584_010 Hb_001373_020--Hb_007137_030 Hb_141142_010--Hb_000844_010 Hb_003384_070 Hb_003384_070 Hb_141142_010--Hb_003384_070 Hb_003175_020 Hb_003175_020 Hb_141142_010--Hb_003175_020 Hb_025194_010 Hb_025194_010 Hb_141142_010--Hb_025194_010 Hb_133636_010 Hb_133636_010 Hb_141142_010--Hb_133636_010 Hb_005157_010 Hb_005157_010 Hb_141142_010--Hb_005157_010 Hb_024357_010 Hb_024357_010 Hb_133508_010--Hb_024357_010 Hb_127400_010 Hb_127400_010 Hb_133508_010--Hb_127400_010 Hb_002239_030 Hb_002239_030 Hb_133508_010--Hb_002239_030 Hb_024857_010 Hb_024857_010 Hb_133508_010--Hb_024857_010 Hb_133508_010--Hb_007137_030 Hb_006911_060 Hb_006911_060 Hb_133508_010--Hb_006911_060 Hb_115116_010 Hb_115116_010 Hb_170516_010--Hb_115116_010 Hb_011344_100 Hb_011344_100 Hb_170516_010--Hb_011344_100 Hb_001907_130 Hb_001907_130 Hb_170516_010--Hb_001907_130 Hb_135569_010 Hb_135569_010 Hb_170516_010--Hb_135569_010 Hb_115445_010 Hb_115445_010 Hb_170516_010--Hb_115445_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.259081 0.0515537 0.093589 0.0982883 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.100627 0

CAGE analysis