Hb_001754_100

Information

Type -
Description -
Location Contig1754: 75572-82133
Sequence    

Annotation

kegg
ID rcu:RCOM_0680910
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID XP_012084242.1
description PREDICTED: peroxidase 5-like [Jatropha curcas]
swissprot
ID A7QEU4
description Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=2
trembl
ID A0A067JV10
description Peroxidase OS=Jatropha curcas GN=JCGZ_18871 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001754_100 0.0 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
2 Hb_000397_170 0.083309112 - - conserved hypothetical protein [Ricinus communis]
3 Hb_150745_010 0.0906834626 - - hypothetical protein JCGZ_17337 [Jatropha curcas]
4 Hb_003226_060 0.1024153102 - - Pectinesterase-2 precursor, putative [Ricinus communis]
5 Hb_000574_180 0.1026575839 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
6 Hb_000413_220 0.1133500595 - - PREDICTED: kinesin-1 [Jatropha curcas]
7 Hb_000256_170 0.1341098076 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
8 Hb_000227_020 0.1399375742 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
9 Hb_025163_020 0.1451789078 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
10 Hb_000563_180 0.1464345235 - - PREDICTED: J protein JJJ2 [Jatropha curcas]
11 Hb_002874_010 0.1487771353 - - PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Jatropha curcas]
12 Hb_000739_250 0.1537805833 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]
13 Hb_064396_010 0.1539082001 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000397_140 0.1563146645 transcription factor TF Family: PLATZ hypothetical protein JCGZ_16980 [Jatropha curcas]
15 Hb_000321_040 0.1627337655 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
16 Hb_027905_040 0.1629873807 transcription factor TF Family: E2F-DP PREDICTED: E2F transcription factor-like E2FF [Jatropha curcas]
17 Hb_005141_020 0.1640039359 - - laccase, putative [Ricinus communis]
18 Hb_005306_030 0.165041178 - - PREDICTED: protein IQ-DOMAIN 1 [Jatropha curcas]
19 Hb_001005_170 0.1657813674 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
20 Hb_008215_020 0.1668008613 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001754_100 Hb_001754_100 Hb_000397_170 Hb_000397_170 Hb_001754_100--Hb_000397_170 Hb_150745_010 Hb_150745_010 Hb_001754_100--Hb_150745_010 Hb_003226_060 Hb_003226_060 Hb_001754_100--Hb_003226_060 Hb_000574_180 Hb_000574_180 Hb_001754_100--Hb_000574_180 Hb_000413_220 Hb_000413_220 Hb_001754_100--Hb_000413_220 Hb_000256_170 Hb_000256_170 Hb_001754_100--Hb_000256_170 Hb_000397_170--Hb_003226_060 Hb_005599_010 Hb_005599_010 Hb_000397_170--Hb_005599_010 Hb_000397_170--Hb_000574_180 Hb_000397_170--Hb_150745_010 Hb_000397_170--Hb_000256_170 Hb_150745_010--Hb_000413_220 Hb_150745_010--Hb_000574_180 Hb_000483_050 Hb_000483_050 Hb_150745_010--Hb_000483_050 Hb_000574_270 Hb_000574_270 Hb_150745_010--Hb_000574_270 Hb_003226_060--Hb_005599_010 Hb_004154_010 Hb_004154_010 Hb_003226_060--Hb_004154_010 Hb_003226_060--Hb_000574_180 Hb_003226_060--Hb_150745_010 Hb_000574_180--Hb_000413_220 Hb_000574_180--Hb_000256_170 Hb_000739_250 Hb_000739_250 Hb_000574_180--Hb_000739_250 Hb_000668_190 Hb_000668_190 Hb_000574_180--Hb_000668_190 Hb_000413_220--Hb_000668_190 Hb_000413_220--Hb_000256_170 Hb_000413_220--Hb_000739_250 Hb_000256_170--Hb_000739_250 Hb_000331_020 Hb_000331_020 Hb_000256_170--Hb_000331_020 Hb_000256_170--Hb_000668_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.243679 2.31445 0.71471 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.347367 0

CAGE analysis