Hb_001754_160

Information

Type -
Description -
Location Contig1754: 123089-123427
Sequence    

Annotation

kegg
ID rcu:RCOM_0680830
description hypothetical protein
nr
ID XP_012083921.1
description PREDICTED: flowering-promoting factor 1-like protein 3 [Jatropha curcas]
swissprot
ID Q0E1D7
description Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os02g0460200 PE=2 SV=1
trembl
ID A0A067K6A6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18865 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001754_160 0.0 - - PREDICTED: flowering-promoting factor 1-like protein 3 [Jatropha curcas]
2 Hb_003643_030 0.1338592109 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Populus euphratica]
3 Hb_000896_070 0.1477641065 - - ammonium transporter, putative [Ricinus communis]
4 Hb_003266_070 0.1863779884 - - -
5 Hb_000116_200 0.2279728083 transcription factor TF Family: HMG hypothetical protein POPTR_0005s10440g [Populus trichocarpa]
6 Hb_011099_010 0.2346180761 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
7 Hb_001195_210 0.2381628031 - - -
8 Hb_002936_020 0.2410480268 - - hypothetical protein VITISV_001748 [Vitis vinifera]
9 Hb_016875_010 0.2490573945 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_002289_140 0.2568430048 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004330_050 0.2692773059 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001404_060 0.2696906278 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
13 Hb_010308_010 0.2699962548 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
14 Hb_000496_080 0.2702098728 - - Proteinase inhibitor, putative [Ricinus communis]
15 Hb_073870_010 0.2706071253 - - hypothetical protein RCOM_0725510 [Ricinus communis]
16 Hb_001300_060 0.2712323551 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
17 Hb_006103_050 0.271452304 - - -
18 Hb_006275_040 0.2733925589 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
19 Hb_020112_010 0.2738407997 - - acyltransferase, putative [Ricinus communis]
20 Hb_001195_670 0.2787675738 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_001754_160 Hb_001754_160 Hb_003643_030 Hb_003643_030 Hb_001754_160--Hb_003643_030 Hb_000896_070 Hb_000896_070 Hb_001754_160--Hb_000896_070 Hb_003266_070 Hb_003266_070 Hb_001754_160--Hb_003266_070 Hb_000116_200 Hb_000116_200 Hb_001754_160--Hb_000116_200 Hb_011099_010 Hb_011099_010 Hb_001754_160--Hb_011099_010 Hb_001195_210 Hb_001195_210 Hb_001754_160--Hb_001195_210 Hb_003643_030--Hb_003266_070 Hb_003643_030--Hb_001195_210 Hb_003643_030--Hb_000116_200 Hb_001143_150 Hb_001143_150 Hb_003643_030--Hb_001143_150 Hb_160246_010 Hb_160246_010 Hb_003643_030--Hb_160246_010 Hb_000347_210 Hb_000347_210 Hb_000896_070--Hb_000347_210 Hb_012799_080 Hb_012799_080 Hb_000896_070--Hb_012799_080 Hb_119808_020 Hb_119808_020 Hb_000896_070--Hb_119808_020 Hb_000935_060 Hb_000935_060 Hb_000896_070--Hb_000935_060 Hb_002936_020 Hb_002936_020 Hb_000896_070--Hb_002936_020 Hb_000087_090 Hb_000087_090 Hb_003266_070--Hb_000087_090 Hb_003266_070--Hb_001143_150 Hb_003266_070--Hb_011099_010 Hb_003266_070--Hb_160246_010 Hb_000116_200--Hb_001195_210 Hb_003376_370 Hb_003376_370 Hb_000116_200--Hb_003376_370 Hb_154600_010 Hb_154600_010 Hb_000116_200--Hb_154600_010 Hb_000031_330 Hb_000031_330 Hb_000116_200--Hb_000031_330 Hb_005965_020 Hb_005965_020 Hb_011099_010--Hb_005965_020 Hb_011099_010--Hb_002936_020 Hb_011099_010--Hb_000031_330 Hb_002289_140 Hb_002289_140 Hb_011099_010--Hb_002289_140 Hb_005672_030 Hb_005672_030 Hb_001195_210--Hb_005672_030 Hb_015934_100 Hb_015934_100 Hb_001195_210--Hb_015934_100 Hb_000853_010 Hb_000853_010 Hb_001195_210--Hb_000853_010 Hb_000007_070 Hb_000007_070 Hb_001195_210--Hb_000007_070 Hb_146901_020 Hb_146901_020 Hb_001195_210--Hb_146901_020 Hb_001416_170 Hb_001416_170 Hb_001195_210--Hb_001416_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.189779 0.947006 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.220376 0 0.296538 0

CAGE analysis