Hb_001769_030

Information

Type -
Description -
Location Contig1769: 17314-19653
Sequence    

Annotation

kegg
ID rcu:RCOM_1587290
description protein binding protein, putative
nr
ID XP_012068208.1
description PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067LAT4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16017 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001769_030 0.0 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
2 Hb_001623_470 0.0925195032 - - ammonium transporter, putative [Ricinus communis]
3 Hb_000489_020 0.1098087546 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
4 Hb_152718_010 0.1223970322 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
5 Hb_005333_100 0.1338939538 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001355_110 0.136747 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
7 Hb_000203_060 0.1418350819 transcription factor TF Family: G2-like hypothetical protein POPTR_0004s05660g [Populus trichocarpa]
8 Hb_000265_020 0.1422746939 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
9 Hb_000876_050 0.1442475497 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
10 Hb_000976_060 0.1443495125 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
11 Hb_001675_130 0.1456204593 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
12 Hb_001709_070 0.1465392468 - - carbohydrate binding protein, putative [Ricinus communis]
13 Hb_012753_200 0.1467801054 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
14 Hb_003878_100 0.1481082731 desease resistance Gene Name: NB-ARC LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
15 Hb_011174_100 0.1484056978 - - ubiquitin-protein ligase, putative [Ricinus communis]
16 Hb_000221_170 0.1484486938 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
17 Hb_004162_040 0.14907997 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
18 Hb_120268_010 0.1491855173 - - PREDICTED: chitin elicitor receptor kinase 1-like isoform X3 [Populus euphratica]
19 Hb_000684_010 0.1507686517 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
20 Hb_007709_010 0.1513205476 - - -

Gene co-expression network

sample Hb_001769_030 Hb_001769_030 Hb_001623_470 Hb_001623_470 Hb_001769_030--Hb_001623_470 Hb_000489_020 Hb_000489_020 Hb_001769_030--Hb_000489_020 Hb_152718_010 Hb_152718_010 Hb_001769_030--Hb_152718_010 Hb_005333_100 Hb_005333_100 Hb_001769_030--Hb_005333_100 Hb_001355_110 Hb_001355_110 Hb_001769_030--Hb_001355_110 Hb_000203_060 Hb_000203_060 Hb_001769_030--Hb_000203_060 Hb_001623_470--Hb_001355_110 Hb_001623_470--Hb_000489_020 Hb_001623_470--Hb_005333_100 Hb_001266_020 Hb_001266_020 Hb_001623_470--Hb_001266_020 Hb_000976_060 Hb_000976_060 Hb_001623_470--Hb_000976_060 Hb_000265_020 Hb_000265_020 Hb_000489_020--Hb_000265_020 Hb_000489_020--Hb_001355_110 Hb_000489_020--Hb_005333_100 Hb_000489_020--Hb_152718_010 Hb_118777_010 Hb_118777_010 Hb_152718_010--Hb_118777_010 Hb_152718_010--Hb_005333_100 Hb_152718_010--Hb_000976_060 Hb_152718_010--Hb_000265_020 Hb_000120_980 Hb_000120_980 Hb_005333_100--Hb_000120_980 Hb_000684_010 Hb_000684_010 Hb_005333_100--Hb_000684_010 Hb_005333_100--Hb_000976_060 Hb_001838_010 Hb_001838_010 Hb_005333_100--Hb_001838_010 Hb_000255_020 Hb_000255_020 Hb_005333_100--Hb_000255_020 Hb_001355_110--Hb_001266_020 Hb_001621_020 Hb_001621_020 Hb_001355_110--Hb_001621_020 Hb_001102_270 Hb_001102_270 Hb_001355_110--Hb_001102_270 Hb_012753_200 Hb_012753_200 Hb_001355_110--Hb_012753_200 Hb_120268_010 Hb_120268_010 Hb_000203_060--Hb_120268_010 Hb_004162_040 Hb_004162_040 Hb_000203_060--Hb_004162_040 Hb_148121_030 Hb_148121_030 Hb_000203_060--Hb_148121_030 Hb_001709_070 Hb_001709_070 Hb_000203_060--Hb_001709_070 Hb_000203_060--Hb_001623_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0185326 1.33119 0.288801 0.0960571 0 0.0162128
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.24473 0.280539

CAGE analysis