Hb_001770_010

Information

Type -
Description -
Location Contig1770: 1213-6191
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023531mg
description hypothetical protein
nr
ID KDP41372.1
description hypothetical protein JCGZ_15779 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A067KYY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15779 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at4g08850-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001770_010 0.0 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
2 Hb_023344_020 0.1752151138 - - -
3 Hb_000930_020 0.2400202066 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
4 Hb_003090_170 0.2434704917 - - PREDICTED: uncharacterized protein LOC105646673 [Jatropha curcas]
5 Hb_186312_010 0.250935709 - - PREDICTED: O-acyltransferase WSD1-like [Populus euphratica]
6 Hb_000805_220 0.2588668905 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_002060_070 0.2699988508 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
8 Hb_009492_020 0.2778486935 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_000096_050 0.2795606629 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001379_080 0.2814498592 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
11 Hb_006501_140 0.283811684 - - PREDICTED: MATE efflux family protein 9-like [Jatropha curcas]
12 Hb_100526_020 0.2848546491 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
13 Hb_000271_080 0.2850370308 - - hypothetical protein POPTR_0006s08460g [Populus trichocarpa]
14 Hb_000068_040 0.2886511515 - - Inter-alpha-trypsin inhibitor heavy chain H3 precursor, putative [Ricinus communis]
15 Hb_171693_010 0.291985154 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
16 Hb_082972_010 0.2937610442 - - -
17 Hb_002837_080 0.2976216777 - - acyltransferase, putative [Ricinus communis]
18 Hb_003589_100 0.2980596912 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
19 Hb_183193_010 0.2985378169 - - gibberellin 20-oxidase, putative [Ricinus communis]
20 Hb_176486_020 0.2999640196 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Populus euphratica]

Gene co-expression network

sample Hb_001770_010 Hb_001770_010 Hb_023344_020 Hb_023344_020 Hb_001770_010--Hb_023344_020 Hb_000930_020 Hb_000930_020 Hb_001770_010--Hb_000930_020 Hb_003090_170 Hb_003090_170 Hb_001770_010--Hb_003090_170 Hb_186312_010 Hb_186312_010 Hb_001770_010--Hb_186312_010 Hb_000805_220 Hb_000805_220 Hb_001770_010--Hb_000805_220 Hb_002060_070 Hb_002060_070 Hb_001770_010--Hb_002060_070 Hb_010457_040 Hb_010457_040 Hb_023344_020--Hb_010457_040 Hb_080192_010 Hb_080192_010 Hb_023344_020--Hb_080192_010 Hb_003589_100 Hb_003589_100 Hb_023344_020--Hb_003589_100 Hb_009492_020 Hb_009492_020 Hb_023344_020--Hb_009492_020 Hb_000271_080 Hb_000271_080 Hb_023344_020--Hb_000271_080 Hb_000096_050 Hb_000096_050 Hb_000930_020--Hb_000096_050 Hb_000930_020--Hb_000805_220 Hb_100526_020 Hb_100526_020 Hb_000930_020--Hb_100526_020 Hb_000930_020--Hb_002060_070 Hb_000930_020--Hb_009492_020 Hb_000974_030 Hb_000974_030 Hb_000930_020--Hb_000974_030 Hb_003090_170--Hb_186312_010 Hb_007103_020 Hb_007103_020 Hb_003090_170--Hb_007103_020 Hb_000258_230 Hb_000258_230 Hb_003090_170--Hb_000258_230 Hb_000068_040 Hb_000068_040 Hb_003090_170--Hb_000068_040 Hb_005790_010 Hb_005790_010 Hb_003090_170--Hb_005790_010 Hb_026050_010 Hb_026050_010 Hb_003090_170--Hb_026050_010 Hb_002076_030 Hb_002076_030 Hb_186312_010--Hb_002076_030 Hb_000369_040 Hb_000369_040 Hb_186312_010--Hb_000369_040 Hb_002631_110 Hb_002631_110 Hb_186312_010--Hb_002631_110 Hb_032202_010 Hb_032202_010 Hb_186312_010--Hb_032202_010 Hb_186312_010--Hb_000068_040 Hb_006501_140 Hb_006501_140 Hb_000805_220--Hb_006501_140 Hb_000805_220--Hb_009492_020 Hb_000805_220--Hb_002060_070 Hb_000805_220--Hb_100526_020 Hb_000805_220--Hb_000096_050 Hb_082972_010 Hb_082972_010 Hb_002060_070--Hb_082972_010 Hb_001817_110 Hb_001817_110 Hb_002060_070--Hb_001817_110 Hb_002837_080 Hb_002837_080 Hb_002060_070--Hb_002837_080 Hb_001379_080 Hb_001379_080 Hb_002060_070--Hb_001379_080 Hb_002060_070--Hb_000096_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0335984 0 0.0355027 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0140003 0 0 0.0297549

CAGE analysis