Hb_001777_010

Information

Type -
Description -
Location Contig1777: 53223-55240
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001777_010 0.0 - - -
2 Hb_000419_140 0.0609740253 - - Aquaporin PIP2.1, putative [Ricinus communis]
3 Hb_000076_280 0.0906906147 - - PREDICTED: pectinesterase-like [Populus euphratica]
4 Hb_002566_020 0.0938997592 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
5 Hb_000329_010 0.0954090725 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
6 Hb_009456_010 0.0972197921 - - PREDICTED: cinnamoyl-CoA reductase 1-like isoform X3 [Populus euphratica]
7 Hb_001769_070 0.1004740882 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
8 Hb_000834_130 0.1012502832 - - conserved hypothetical protein [Ricinus communis]
9 Hb_027400_020 0.1014978697 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]
10 Hb_031224_010 0.1084671329 - - -
11 Hb_002616_020 0.1193119573 - - PREDICTED: peroxidase 3 [Jatropha curcas]
12 Hb_000389_100 0.1201486791 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
13 Hb_010264_020 0.1222803697 - - unnamed protein product [Vitis vinifera]
14 Hb_002809_080 0.1231384066 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000015_190 0.1269294415 - - PREDICTED: uncharacterized protein LOC105647810 [Jatropha curcas]
16 Hb_003607_090 0.1277625095 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
17 Hb_178049_010 0.1279659813 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
18 Hb_002869_090 0.1280880636 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
19 Hb_005332_160 0.131790309 - - PREDICTED: BAG family molecular chaperone regulator 2-like [Jatropha curcas]
20 Hb_141194_020 0.1324339932 - - carbohydrate transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_001777_010 Hb_001777_010 Hb_000419_140 Hb_000419_140 Hb_001777_010--Hb_000419_140 Hb_000076_280 Hb_000076_280 Hb_001777_010--Hb_000076_280 Hb_002566_020 Hb_002566_020 Hb_001777_010--Hb_002566_020 Hb_000329_010 Hb_000329_010 Hb_001777_010--Hb_000329_010 Hb_009456_010 Hb_009456_010 Hb_001777_010--Hb_009456_010 Hb_001769_070 Hb_001769_070 Hb_001777_010--Hb_001769_070 Hb_000419_140--Hb_000076_280 Hb_027400_020 Hb_027400_020 Hb_000419_140--Hb_027400_020 Hb_000419_140--Hb_001769_070 Hb_000419_140--Hb_000329_010 Hb_002616_020 Hb_002616_020 Hb_000419_140--Hb_002616_020 Hb_000076_280--Hb_027400_020 Hb_000076_280--Hb_001769_070 Hb_000076_280--Hb_000329_010 Hb_000076_280--Hb_002616_020 Hb_002809_080 Hb_002809_080 Hb_000076_280--Hb_002809_080 Hb_002566_020--Hb_009456_010 Hb_002783_180 Hb_002783_180 Hb_002566_020--Hb_002783_180 Hb_031224_010 Hb_031224_010 Hb_002566_020--Hb_031224_010 Hb_003633_170 Hb_003633_170 Hb_002566_020--Hb_003633_170 Hb_000389_100 Hb_000389_100 Hb_002566_020--Hb_000389_100 Hb_007370_010 Hb_007370_010 Hb_002566_020--Hb_007370_010 Hb_000329_010--Hb_002809_080 Hb_000329_010--Hb_001769_070 Hb_000329_010--Hb_031224_010 Hb_149055_010 Hb_149055_010 Hb_000329_010--Hb_149055_010 Hb_009456_010--Hb_002783_180 Hb_009456_010--Hb_007370_010 Hb_009456_010--Hb_031224_010 Hb_009456_010--Hb_000389_100 Hb_001769_070--Hb_027400_020 Hb_002518_020 Hb_002518_020 Hb_001769_070--Hb_002518_020 Hb_005000_280 Hb_005000_280 Hb_001769_070--Hb_005000_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.743763 3.44578 11.3352 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.30786 2.73364

CAGE analysis