Hb_001796_010

Information

Type -
Description -
Location Contig1796: 10893-12125
Sequence    

Annotation

kegg
ID rcu:RCOM_0274170
description purine transporter, putative
nr
ID XP_002533991.1
description purine transporter, putative [Ricinus communis]
swissprot
ID Q9SY29
description Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1
trembl
ID B9T6X2
description Purine transporter, putative OS=Ricinus communis GN=RCOM_0274170 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable purine permease 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001796_010 0.0 - - purine transporter, putative [Ricinus communis]
2 Hb_186671_020 0.0493840142 - - ankyrin repeat-containing protein, putative [Ricinus communis]
3 Hb_018609_010 0.0622903431 - - conserved hypothetical protein [Ricinus communis]
4 Hb_099085_010 0.0742886923 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
5 Hb_064583_010 0.0791585538 - - PREDICTED: germin-like protein subfamily 1 member 7 [Vitis vinifera]
6 Hb_011980_020 0.0794760445 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_163950_060 0.0796781367 - - multidrug resistance pump, putative [Ricinus communis]
8 Hb_005050_010 0.0805418216 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
9 Hb_000215_120 0.0831148152 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
10 Hb_000979_270 0.0849923518 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]
11 Hb_007264_050 0.0891888114 - - -
12 Hb_004096_040 0.0912431283 - - cytochrome P450, putative [Ricinus communis]
13 Hb_004059_010 0.093061417 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
14 Hb_000563_370 0.0931636355 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
15 Hb_007328_020 0.0936516182 - - -
16 Hb_000215_380 0.0944943805 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
17 Hb_005687_020 0.0947545851 - - P66 protein [Hevea brasiliensis]
18 Hb_000395_160 0.0954183908 - - hypothetical protein POPTR_0006s25490g [Populus trichocarpa]
19 Hb_000004_150 0.0992138937 - - hypothetical protein RCOM_1382630 [Ricinus communis]
20 Hb_000007_170 0.0992138937 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]

Gene co-expression network

sample Hb_001796_010 Hb_001796_010 Hb_186671_020 Hb_186671_020 Hb_001796_010--Hb_186671_020 Hb_018609_010 Hb_018609_010 Hb_001796_010--Hb_018609_010 Hb_099085_010 Hb_099085_010 Hb_001796_010--Hb_099085_010 Hb_064583_010 Hb_064583_010 Hb_001796_010--Hb_064583_010 Hb_011980_020 Hb_011980_020 Hb_001796_010--Hb_011980_020 Hb_163950_060 Hb_163950_060 Hb_001796_010--Hb_163950_060 Hb_186671_020--Hb_163950_060 Hb_186671_020--Hb_018609_010 Hb_005050_010 Hb_005050_010 Hb_186671_020--Hb_005050_010 Hb_000395_160 Hb_000395_160 Hb_186671_020--Hb_000395_160 Hb_000979_270 Hb_000979_270 Hb_186671_020--Hb_000979_270 Hb_018609_010--Hb_005050_010 Hb_018609_010--Hb_099085_010 Hb_018609_010--Hb_000979_270 Hb_018609_010--Hb_064583_010 Hb_099085_010--Hb_064583_010 Hb_000563_370 Hb_000563_370 Hb_099085_010--Hb_000563_370 Hb_007328_020 Hb_007328_020 Hb_099085_010--Hb_007328_020 Hb_000215_380 Hb_000215_380 Hb_099085_010--Hb_000215_380 Hb_099085_010--Hb_005050_010 Hb_007264_050 Hb_007264_050 Hb_099085_010--Hb_007264_050 Hb_064583_010--Hb_000563_370 Hb_064583_010--Hb_007328_020 Hb_064583_010--Hb_000215_380 Hb_044724_020 Hb_044724_020 Hb_064583_010--Hb_044724_020 Hb_064583_010--Hb_007264_050 Hb_011980_020--Hb_163950_060 Hb_007943_040 Hb_007943_040 Hb_011980_020--Hb_007943_040 Hb_005687_020 Hb_005687_020 Hb_011980_020--Hb_005687_020 Hb_000336_170 Hb_000336_170 Hb_011980_020--Hb_000336_170 Hb_008978_010 Hb_008978_010 Hb_011980_020--Hb_008978_010 Hb_163950_060--Hb_000336_170 Hb_163950_060--Hb_007943_040 Hb_163950_060--Hb_008978_010 Hb_163950_060--Hb_005687_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.32943 0 0.0141343 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.012371 0

CAGE analysis