Hb_001799_080

Information

Type -
Description -
Location Contig1799: 80020-81543
Sequence    

Annotation

kegg
ID rcu:RCOM_0658020
description Flavonol synthase/flavanone 3-hydroxylase, putative (EC:1.14.11.23)
nr
ID XP_002526463.1
description Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
swissprot
ID D4N502
description Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1
trembl
ID B9SKK0
description Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis GN=RCOM_0658020 PE=3 SV=1
Gene Ontology
ID GO:0016706
description flavonol synthase flavanone 3-hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001799_080 0.0 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
2 Hb_004460_010 0.2065169504 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
3 Hb_000120_120 0.2149131915 - - PREDICTED: phosphoinositide phospholipase C 2 [Jatropha curcas]
4 Hb_000637_120 0.2287814389 - - PREDICTED: aspartic proteinase Asp1 [Jatropha curcas]
5 Hb_013818_060 0.2312997385 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
6 Hb_020096_020 0.2361187009 - - -
7 Hb_008014_070 0.2439504513 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_023732_040 0.2482682441 - - cytochrome P450, putative [Ricinus communis]
9 Hb_004871_050 0.2484297384 - - hypothetical protein F383_22684 [Gossypium arboreum]
10 Hb_006816_450 0.2484751392 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000141_240 0.2558909653 - - PREDICTED: protein NRT1/ PTR FAMILY 6.3 isoform X1 [Jatropha curcas]
12 Hb_003599_070 0.255915012 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_027892_010 0.256058677 transcription factor TF Family: bHLH LMYC1 [Hevea brasiliensis]
14 Hb_001100_010 0.2572510094 - - F-box/FBD/LRR-repeat protein [Medicago truncatula]
15 Hb_000972_010 0.2589131491 - - PREDICTED: kinesin KP1 [Jatropha curcas]
16 Hb_001268_400 0.2598784 - - PREDICTED: uncharacterized protein LOC104583970 [Brachypodium distachyon]
17 Hb_001766_100 0.2613071258 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_001534_170 0.2700889692 - - Uncharacterized protein TCM_038456 [Theobroma cacao]
19 Hb_011360_080 0.2707915402 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
20 Hb_143629_090 0.2719752774 - - PREDICTED: uncharacterized protein LOC105647358 [Jatropha curcas]

Gene co-expression network

sample Hb_001799_080 Hb_001799_080 Hb_004460_010 Hb_004460_010 Hb_001799_080--Hb_004460_010 Hb_000120_120 Hb_000120_120 Hb_001799_080--Hb_000120_120 Hb_000637_120 Hb_000637_120 Hb_001799_080--Hb_000637_120 Hb_013818_060 Hb_013818_060 Hb_001799_080--Hb_013818_060 Hb_020096_020 Hb_020096_020 Hb_001799_080--Hb_020096_020 Hb_008014_070 Hb_008014_070 Hb_001799_080--Hb_008014_070 Hb_004460_010--Hb_013818_060 Hb_004460_010--Hb_000120_120 Hb_011360_080 Hb_011360_080 Hb_004460_010--Hb_011360_080 Hb_003599_070 Hb_003599_070 Hb_004460_010--Hb_003599_070 Hb_000477_080 Hb_000477_080 Hb_004460_010--Hb_000477_080 Hb_000120_120--Hb_013818_060 Hb_027892_010 Hb_027892_010 Hb_000120_120--Hb_027892_010 Hb_000249_130 Hb_000249_130 Hb_000120_120--Hb_000249_130 Hb_000120_650 Hb_000120_650 Hb_000120_120--Hb_000120_650 Hb_004871_050 Hb_004871_050 Hb_000120_120--Hb_004871_050 Hb_000249_090 Hb_000249_090 Hb_000120_120--Hb_000249_090 Hb_149539_010 Hb_149539_010 Hb_000637_120--Hb_149539_010 Hb_006816_450 Hb_006816_450 Hb_000637_120--Hb_006816_450 Hb_161072_010 Hb_161072_010 Hb_000637_120--Hb_161072_010 Hb_000436_010 Hb_000436_010 Hb_000637_120--Hb_000436_010 Hb_001100_010 Hb_001100_010 Hb_000637_120--Hb_001100_010 Hb_013818_060--Hb_000249_130 Hb_013818_060--Hb_000249_090 Hb_013818_060--Hb_027892_010 Hb_013818_060--Hb_000120_650 Hb_143629_090 Hb_143629_090 Hb_013818_060--Hb_143629_090 Hb_007590_060 Hb_007590_060 Hb_020096_020--Hb_007590_060 Hb_020096_020--Hb_008014_070 Hb_159679_010 Hb_159679_010 Hb_020096_020--Hb_159679_010 Hb_001638_210 Hb_001638_210 Hb_020096_020--Hb_001638_210 Hb_020096_020--Hb_027892_010 Hb_006061_010 Hb_006061_010 Hb_008014_070--Hb_006061_010 Hb_008014_070--Hb_000120_120 Hb_163950_010 Hb_163950_010 Hb_008014_070--Hb_163950_010 Hb_002890_250 Hb_002890_250 Hb_008014_070--Hb_002890_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.329911 0.0851085 0 0 0.131731 0.0667052
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.21222 0.125178 1.37902 0.167953 0

CAGE analysis