Hb_001810_010

Information

Type -
Description -
Location Contig1810: 1570-8250
Sequence    

Annotation

kegg
ID pda:103713459
description uncharacterized LOC103713459
nr
ID XP_010273366.1
description PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
swissprot
ID Q9SA25
description Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1
trembl
ID F6H0G0
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01370 PE=4 SV=1
Gene Ontology
ID GO:0005622
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001810_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
2 Hb_012268_010 0.1137816909 - - glutamic acid-rich protein [Manihot esculenta]
3 Hb_000940_020 0.1287743626 - - hypothetical protein POPTR_0004s17500g [Populus trichocarpa]
4 Hb_002217_440 0.134670149 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_005396_100 0.1374710974 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001363_010 0.1403925123 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
7 Hb_000345_190 0.1459282595 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]
8 Hb_001363_030 0.148423777 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
9 Hb_008616_060 0.1502577399 - - syntaxin, putative [Ricinus communis]
10 Hb_000977_160 0.1529257079 - - Serine-threonine protein kinase, plant-type, putative [Theobroma cacao]
11 Hb_005588_020 0.1573938225 - - PREDICTED: patatin-like protein 2 [Vitis vinifera]
12 Hb_118777_010 0.1575251976 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
13 Hb_005054_300 0.1609977775 - - aquaporin [Hevea brasiliensis]
14 Hb_000535_030 0.1613409297 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
15 Hb_000070_140 0.1634745216 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
16 Hb_000532_060 0.1635982403 - - copper-transporting atpase p-type, putative [Ricinus communis]
17 Hb_001009_110 0.1676734274 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
18 Hb_003376_340 0.1695346908 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000035_360 0.1695643655 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
20 Hb_001486_130 0.1702237104 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]

Gene co-expression network

sample Hb_001810_010 Hb_001810_010 Hb_012268_010 Hb_012268_010 Hb_001810_010--Hb_012268_010 Hb_000940_020 Hb_000940_020 Hb_001810_010--Hb_000940_020 Hb_002217_440 Hb_002217_440 Hb_001810_010--Hb_002217_440 Hb_005396_100 Hb_005396_100 Hb_001810_010--Hb_005396_100 Hb_001363_010 Hb_001363_010 Hb_001810_010--Hb_001363_010 Hb_000345_190 Hb_000345_190 Hb_001810_010--Hb_000345_190 Hb_000535_030 Hb_000535_030 Hb_012268_010--Hb_000535_030 Hb_000070_140 Hb_000070_140 Hb_012268_010--Hb_000070_140 Hb_012268_010--Hb_001363_010 Hb_003636_010 Hb_003636_010 Hb_012268_010--Hb_003636_010 Hb_003117_060 Hb_003117_060 Hb_012268_010--Hb_003117_060 Hb_000940_020--Hb_000345_190 Hb_002701_140 Hb_002701_140 Hb_000940_020--Hb_002701_140 Hb_004586_380 Hb_004586_380 Hb_000940_020--Hb_004586_380 Hb_029866_140 Hb_029866_140 Hb_000940_020--Hb_029866_140 Hb_006351_080 Hb_006351_080 Hb_000940_020--Hb_006351_080 Hb_013057_030 Hb_013057_030 Hb_002217_440--Hb_013057_030 Hb_048653_020 Hb_048653_020 Hb_002217_440--Hb_048653_020 Hb_000417_290 Hb_000417_290 Hb_002217_440--Hb_000417_290 Hb_008616_060 Hb_008616_060 Hb_002217_440--Hb_008616_060 Hb_048653_040 Hb_048653_040 Hb_002217_440--Hb_048653_040 Hb_005396_100--Hb_001363_010 Hb_000977_160 Hb_000977_160 Hb_005396_100--Hb_000977_160 Hb_000233_060 Hb_000233_060 Hb_005396_100--Hb_000233_060 Hb_007785_020 Hb_007785_020 Hb_005396_100--Hb_007785_020 Hb_002067_110 Hb_002067_110 Hb_005396_100--Hb_002067_110 Hb_005396_100--Hb_000345_190 Hb_001363_010--Hb_000977_160 Hb_001363_010--Hb_000535_030 Hb_003385_090 Hb_003385_090 Hb_001363_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_001363_010--Hb_032651_060 Hb_000532_060 Hb_000532_060 Hb_000345_190--Hb_000532_060 Hb_046117_050 Hb_046117_050 Hb_000345_190--Hb_046117_050 Hb_000170_230 Hb_000170_230 Hb_000345_190--Hb_000170_230 Hb_135811_020 Hb_135811_020 Hb_000345_190--Hb_135811_020 Hb_106969_010 Hb_106969_010 Hb_000345_190--Hb_106969_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0498048 6.49395 0.197208 0.19324 0.0610989 0.0807899
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0309271 0.0405647 0.0623621 1.95653 0.104379

CAGE analysis