Hb_001810_020

Information

Type -
Description -
Location Contig1810: 24039-24590
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0004674
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001810_020 0.0 - - -
2 Hb_002023_040 0.190264482 - - -
3 Hb_148658_010 0.2376813207 - - -
4 Hb_000066_180 0.2516692596 - - hypothetical protein POPTR_0008s02710g [Populus trichocarpa]
5 Hb_157968_010 0.2520299278 - - Disease resistance protein RPS5, putative [Ricinus communis]
6 Hb_090545_010 0.2740361191 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
7 Hb_007416_080 0.2827689484 - - -
8 Hb_000317_130 0.2845827281 - - vacuolar membrane protein pep3, putative [Ricinus communis]
9 Hb_000193_030 0.2846029579 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
10 Hb_046120_010 0.290753298 - - -
11 Hb_021068_030 0.2944885446 transcription factor TF Family: M-type hypothetical protein B456_010G032700 [Gossypium raimondii]
12 Hb_001708_010 0.2946688794 - - PREDICTED: putative disease resistance protein At4g11170 [Malus domestica]
13 Hb_001278_080 0.2959139627 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_09311 [Jatropha curcas]
14 Hb_027287_010 0.2961753254 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000098_300 0.3009483997 - - -
16 Hb_000082_020 0.3033438335 - - -
17 Hb_006913_050 0.304531942 - - -
18 Hb_094132_010 0.3065808734 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
19 Hb_048183_010 0.3080557416 - - nicotinate phosphoribosyltransferase, putative [Ricinus communis]
20 Hb_030885_020 0.308285816 - - -

Gene co-expression network

sample Hb_001810_020 Hb_001810_020 Hb_002023_040 Hb_002023_040 Hb_001810_020--Hb_002023_040 Hb_148658_010 Hb_148658_010 Hb_001810_020--Hb_148658_010 Hb_000066_180 Hb_000066_180 Hb_001810_020--Hb_000066_180 Hb_157968_010 Hb_157968_010 Hb_001810_020--Hb_157968_010 Hb_090545_010 Hb_090545_010 Hb_001810_020--Hb_090545_010 Hb_007416_080 Hb_007416_080 Hb_001810_020--Hb_007416_080 Hb_001278_080 Hb_001278_080 Hb_002023_040--Hb_001278_080 Hb_021068_030 Hb_021068_030 Hb_002023_040--Hb_021068_030 Hb_002023_040--Hb_000066_180 Hb_000053_050 Hb_000053_050 Hb_002023_040--Hb_000053_050 Hb_000193_030 Hb_000193_030 Hb_002023_040--Hb_000193_030 Hb_002078_190 Hb_002078_190 Hb_148658_010--Hb_002078_190 Hb_106873_020 Hb_106873_020 Hb_148658_010--Hb_106873_020 Hb_027287_010 Hb_027287_010 Hb_148658_010--Hb_027287_010 Hb_148658_010--Hb_157968_010 Hb_148658_010--Hb_000066_180 Hb_116367_010 Hb_116367_010 Hb_148658_010--Hb_116367_010 Hb_001907_090 Hb_001907_090 Hb_000066_180--Hb_001907_090 Hb_000066_180--Hb_000193_030 Hb_000340_330 Hb_000340_330 Hb_000066_180--Hb_000340_330 Hb_005318_020 Hb_005318_020 Hb_000066_180--Hb_005318_020 Hb_094132_010 Hb_094132_010 Hb_000066_180--Hb_094132_010 Hb_157968_010--Hb_002078_190 Hb_001708_010 Hb_001708_010 Hb_157968_010--Hb_001708_010 Hb_048183_010 Hb_048183_010 Hb_157968_010--Hb_048183_010 Hb_157968_010--Hb_116367_010 Hb_006913_050 Hb_006913_050 Hb_090545_010--Hb_006913_050 Hb_141212_010 Hb_141212_010 Hb_090545_010--Hb_141212_010 Hb_026337_010 Hb_026337_010 Hb_090545_010--Hb_026337_010 Hb_046120_010 Hb_046120_010 Hb_090545_010--Hb_046120_010 Hb_090545_010--Hb_001708_010 Hb_000123_020 Hb_000123_020 Hb_090545_010--Hb_000123_020 Hb_007416_080--Hb_048183_010 Hb_000562_010 Hb_000562_010 Hb_007416_080--Hb_000562_010 Hb_158296_010 Hb_158296_010 Hb_007416_080--Hb_158296_010 Hb_133648_010 Hb_133648_010 Hb_007416_080--Hb_133648_010 Hb_000164_130 Hb_000164_130 Hb_007416_080--Hb_000164_130 Hb_001208_020 Hb_001208_020 Hb_007416_080--Hb_001208_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.121634 0.0493655 0.259259 0 0.397637
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0986057 0

CAGE analysis