Hb_001811_080

Information

Type -
Description -
Location Contig1811: 49467-54407
Sequence    

Annotation

kegg
ID rcu:RCOM_0449370
description fructose-1,6-bisphosphatase, putative (EC:3.1.3.11)
nr
ID XP_012081371.1
description PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
swissprot
ID P22418
description Fructose-1,6-bisphosphatase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
trembl
ID B9T3E7
description Fructose-1,6-bisphosphatase, putative OS=Ricinus communis GN=RCOM_0449370 PE=3 SV=1
Gene Ontology
ID GO:0042132
description fructose- - chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17569: 49135-50174 , PASA_asmbl_17570: 49135-50202 , PASA_asmbl_17571: 49135-50202
cDNA
(Sanger)
(ID:Location)		 007_B11.ab1: 49345-50022 , 046_F19.ab1: 49135-49840

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001811_080 0.0 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
2 Hb_000329_080 0.1070360531 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
3 Hb_002811_190 0.1153625067 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
4 Hb_000163_110 0.1180975194 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
5 Hb_000963_090 0.1229178795 rubber biosynthesis Gene Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea brasiliensis]
6 Hb_000977_150 0.1396015155 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
7 Hb_001365_010 0.1433769844 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
8 Hb_062013_010 0.1524612444 - - phosphoprotein phosphatase, putative [Ricinus communis]
9 Hb_001405_080 0.1545493106 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
10 Hb_000300_680 0.1587833035 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
11 Hb_003226_190 0.1594573159 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
12 Hb_078477_060 0.1595053636 - - PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
13 Hb_158144_020 0.1639458358 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
14 Hb_001793_030 0.1660664413 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
15 Hb_010632_010 0.1667472488 - - PREDICTED: bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Jatropha curcas]
16 Hb_021409_190 0.1687212648 - - PREDICTED: luminal-binding protein 5-like [Jatropha curcas]
17 Hb_001080_150 0.1698662581 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
18 Hb_001365_020 0.1699292914 - - hypothetical protein PRUPE_ppa000927mg [Prunus persica]
19 Hb_000414_180 0.1732064831 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Vitis vinifera]
20 Hb_000014_190 0.1738784399 - - Phytoene dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001811_080 Hb_001811_080 Hb_000329_080 Hb_000329_080 Hb_001811_080--Hb_000329_080 Hb_002811_190 Hb_002811_190 Hb_001811_080--Hb_002811_190 Hb_000163_110 Hb_000163_110 Hb_001811_080--Hb_000163_110 Hb_000963_090 Hb_000963_090 Hb_001811_080--Hb_000963_090 Hb_000977_150 Hb_000977_150 Hb_001811_080--Hb_000977_150 Hb_001365_010 Hb_001365_010 Hb_001811_080--Hb_001365_010 Hb_000329_080--Hb_001365_010 Hb_000329_080--Hb_000163_110 Hb_001195_370 Hb_001195_370 Hb_000329_080--Hb_001195_370 Hb_000300_680 Hb_000300_680 Hb_000329_080--Hb_000300_680 Hb_000329_080--Hb_000977_150 Hb_001425_010 Hb_001425_010 Hb_002811_190--Hb_001425_010 Hb_002811_190--Hb_000977_150 Hb_001405_080 Hb_001405_080 Hb_002811_190--Hb_001405_080 Hb_021409_190 Hb_021409_190 Hb_002811_190--Hb_021409_190 Hb_000640_260 Hb_000640_260 Hb_002811_190--Hb_000640_260 Hb_002811_190--Hb_000329_080 Hb_001365_020 Hb_001365_020 Hb_000163_110--Hb_001365_020 Hb_000163_110--Hb_001365_010 Hb_000441_050 Hb_000441_050 Hb_000163_110--Hb_000441_050 Hb_005977_060 Hb_005977_060 Hb_000163_110--Hb_005977_060 Hb_000163_110--Hb_000300_680 Hb_010632_010 Hb_010632_010 Hb_000963_090--Hb_010632_010 Hb_078477_060 Hb_078477_060 Hb_000963_090--Hb_078477_060 Hb_000963_090--Hb_000329_080 Hb_000963_090--Hb_002811_190 Hb_001080_150 Hb_001080_150 Hb_000963_090--Hb_001080_150 Hb_000032_600 Hb_000032_600 Hb_000977_150--Hb_000032_600 Hb_001054_060 Hb_001054_060 Hb_000977_150--Hb_001054_060 Hb_067664_010 Hb_067664_010 Hb_000977_150--Hb_067664_010 Hb_000977_150--Hb_001195_370 Hb_001365_010--Hb_001365_020 Hb_001365_010--Hb_000441_050 Hb_003783_050 Hb_003783_050 Hb_001365_010--Hb_003783_050 Hb_035834_010 Hb_035834_010 Hb_001365_010--Hb_035834_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.193869 1.22341 3.22824 2.58809 0.453573 0.587244
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.507393 0.917844 0.807929 5.05529 12.5714

CAGE analysis