Hb_001814_060

Information

Type -
Description -
Location Contig1814: 51355-53444
Sequence    

Annotation

kegg
ID cit:102620062
description uncharacterized LOC102620062
nr
ID XP_012092944.1
description PREDICTED: uncharacterized protein LOC105650637 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J8P2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05841 PE=4 SV=1
Gene Ontology
ID GO:0006950
description adenine nucleotide alpha hydrolases-like superfamily protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17643: 53023-53308
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001814_060 0.0 - - PREDICTED: uncharacterized protein LOC105650637 [Jatropha curcas]
2 Hb_000915_190 0.1528618596 - - -
3 Hb_000049_130 0.2135927994 - - PREDICTED: uncharacterized protein LOC104879855 [Vitis vinifera]
4 Hb_000363_450 0.2302531499 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
5 Hb_000445_160 0.2351766398 - - PREDICTED: probable calcium-binding protein CML44 [Jatropha curcas]
6 Hb_000483_320 0.2365863612 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
7 Hb_128750_010 0.2452304783 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
8 Hb_000115_370 0.2458380744 - - PREDICTED: nicotinamide adenine dinucleotide transporter 2, mitochondrial [Jatropha curcas]
9 Hb_004088_050 0.251952188 - - hypothetical protein VITISV_027174 [Vitis vinifera]
10 Hb_010743_010 0.2529731835 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
11 Hb_001331_010 0.2571043408 - - hypothetical protein CISIN_1g039303mg, partial [Citrus sinensis]
12 Hb_010171_010 0.2653423797 - - hypothetical protein VITISV_033646 [Vitis vinifera]
13 Hb_003371_050 0.2694067762 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000505_050 0.2716898655 - - PREDICTED: heparanase-like protein 3 isoform X2 [Gossypium raimondii]
15 Hb_005656_130 0.2728459725 - - PREDICTED: calmodulin-like protein 7 [Jatropha curcas]
16 Hb_181838_010 0.2738831201 - - PREDICTED: uncharacterized protein LOC105631275 [Jatropha curcas]
17 Hb_004807_050 0.2742631083 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
18 Hb_000866_020 0.2747771678 - - hypothetical protein B456_004G042000 [Gossypium raimondii]
19 Hb_000608_150 0.2774805346 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
20 Hb_011649_020 0.2793207385 - - PREDICTED: uncharacterized protein LOC104212904 isoform X1 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_001814_060 Hb_001814_060 Hb_000915_190 Hb_000915_190 Hb_001814_060--Hb_000915_190 Hb_000049_130 Hb_000049_130 Hb_001814_060--Hb_000049_130 Hb_000363_450 Hb_000363_450 Hb_001814_060--Hb_000363_450 Hb_000445_160 Hb_000445_160 Hb_001814_060--Hb_000445_160 Hb_000483_320 Hb_000483_320 Hb_001814_060--Hb_000483_320 Hb_128750_010 Hb_128750_010 Hb_001814_060--Hb_128750_010 Hb_010171_010 Hb_010171_010 Hb_000915_190--Hb_010171_010 Hb_007793_030 Hb_007793_030 Hb_000915_190--Hb_007793_030 Hb_001054_010 Hb_001054_010 Hb_000915_190--Hb_001054_010 Hb_000659_090 Hb_000659_090 Hb_000915_190--Hb_000659_090 Hb_006237_030 Hb_006237_030 Hb_000915_190--Hb_006237_030 Hb_181838_010 Hb_181838_010 Hb_000049_130--Hb_181838_010 Hb_001221_200 Hb_001221_200 Hb_000049_130--Hb_001221_200 Hb_000350_030 Hb_000350_030 Hb_000049_130--Hb_000350_030 Hb_006693_040 Hb_006693_040 Hb_000049_130--Hb_006693_040 Hb_000556_010 Hb_000556_010 Hb_000049_130--Hb_000556_010 Hb_003777_140 Hb_003777_140 Hb_000363_450--Hb_003777_140 Hb_000363_450--Hb_128750_010 Hb_010743_010 Hb_010743_010 Hb_000363_450--Hb_010743_010 Hb_000363_450--Hb_000445_160 Hb_000866_020 Hb_000866_020 Hb_000363_450--Hb_000866_020 Hb_041139_010 Hb_041139_010 Hb_000363_450--Hb_041139_010 Hb_113379_010 Hb_113379_010 Hb_000445_160--Hb_113379_010 Hb_000445_160--Hb_128750_010 Hb_001384_040 Hb_001384_040 Hb_000445_160--Hb_001384_040 Hb_114893_010 Hb_114893_010 Hb_000445_160--Hb_114893_010 Hb_006142_050 Hb_006142_050 Hb_000445_160--Hb_006142_050 Hb_006053_020 Hb_006053_020 Hb_000445_160--Hb_006053_020 Hb_002377_010 Hb_002377_010 Hb_000483_320--Hb_002377_010 Hb_000343_080 Hb_000343_080 Hb_000483_320--Hb_000343_080 Hb_188063_040 Hb_188063_040 Hb_000483_320--Hb_188063_040 Hb_095744_010 Hb_095744_010 Hb_000483_320--Hb_095744_010 Hb_001863_470 Hb_001863_470 Hb_000483_320--Hb_001863_470 Hb_001545_010 Hb_001545_010 Hb_000483_320--Hb_001545_010 Hb_002740_060 Hb_002740_060 Hb_128750_010--Hb_002740_060 Hb_029386_010 Hb_029386_010 Hb_128750_010--Hb_029386_010 Hb_004896_030 Hb_004896_030 Hb_128750_010--Hb_004896_030 Hb_000223_090 Hb_000223_090 Hb_128750_010--Hb_000223_090 Hb_005622_040 Hb_005622_040 Hb_128750_010--Hb_005622_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.063371 0.0842708 0 0.0602743
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0311024 0.147704

CAGE analysis