Hb_001814_070

Information

Type -
Description -
Location Contig1814: 54369-60781
Sequence    

Annotation

kegg
ID rcu:RCOM_1618280
description hypothetical protein
nr
ID XP_012092945.1
description PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBG9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05842 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17645: 54129-59928 , PASA_asmbl_17646: 54412-59863
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001814_070 0.0 - - PREDICTED: uncharacterized protein LOC105650638 [Jatropha curcas]
2 Hb_002289_120 0.0707170045 - - PREDICTED: uncharacterized protein LOC105645218 isoform X2 [Jatropha curcas]
3 Hb_003878_010 0.0745999012 - - PREDICTED: uncharacterized protein LOC105632145 [Jatropha curcas]
4 Hb_128048_010 0.0821437452 - - small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
5 Hb_007875_030 0.0865667045 - - PREDICTED: tubulin-folding cofactor B-like [Jatropha curcas]
6 Hb_001016_030 0.086936508 - - PREDICTED: uncharacterized protein LOC105636529 isoform X2 [Jatropha curcas]
7 Hb_019249_010 0.0884910308 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
8 Hb_008695_040 0.0956184895 - - PREDICTED: small ribosomal subunit protein S13, mitochondrial-like [Jatropha curcas]
9 Hb_003126_090 0.0958813202 - - Rop1 [Hevea brasiliensis]
10 Hb_003544_020 0.0958940011 - - PREDICTED: elongin-A [Jatropha curcas]
11 Hb_181288_010 0.0977125451 - - rac-GTP binding protein, putative [Ricinus communis]
12 Hb_001124_090 0.1000762997 - - acyl carrier protein, putative [Ricinus communis]
13 Hb_004297_070 0.1004212243 - - hypothetical protein POPTR_0009s14820g [Populus trichocarpa]
14 Hb_033153_090 0.1006974198 - - PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Jatropha curcas]
15 Hb_001019_080 0.1016827545 - - hypothetical protein JCGZ_13280 [Jatropha curcas]
16 Hb_000982_090 0.1034020286 - - PREDICTED: zinc finger HIT domain-containing protein 3 [Jatropha curcas]
17 Hb_033594_110 0.1037808222 - - NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis]
18 Hb_001047_240 0.1047350971 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
19 Hb_002811_260 0.1053163669 - - PREDICTED: PITH domain-containing protein At3g04780 [Jatropha curcas]
20 Hb_001140_370 0.1056061725 - - PREDICTED: uncharacterized protein LOC105648463 [Jatropha curcas]

Gene co-expression network

sample Hb_001814_070 Hb_001814_070 Hb_002289_120 Hb_002289_120 Hb_001814_070--Hb_002289_120 Hb_003878_010 Hb_003878_010 Hb_001814_070--Hb_003878_010 Hb_128048_010 Hb_128048_010 Hb_001814_070--Hb_128048_010 Hb_007875_030 Hb_007875_030 Hb_001814_070--Hb_007875_030 Hb_001016_030 Hb_001016_030 Hb_001814_070--Hb_001016_030 Hb_019249_010 Hb_019249_010 Hb_001814_070--Hb_019249_010 Hb_000152_420 Hb_000152_420 Hb_002289_120--Hb_000152_420 Hb_001369_640 Hb_001369_640 Hb_002289_120--Hb_001369_640 Hb_002289_120--Hb_128048_010 Hb_002289_120--Hb_019249_010 Hb_002289_120--Hb_003878_010 Hb_003878_010--Hb_128048_010 Hb_003878_010--Hb_007875_030 Hb_001454_400 Hb_001454_400 Hb_003878_010--Hb_001454_400 Hb_002105_090 Hb_002105_090 Hb_003878_010--Hb_002105_090 Hb_004800_230 Hb_004800_230 Hb_003878_010--Hb_004800_230 Hb_000926_300 Hb_000926_300 Hb_128048_010--Hb_000926_300 Hb_000000_170 Hb_000000_170 Hb_128048_010--Hb_000000_170 Hb_002811_260 Hb_002811_260 Hb_128048_010--Hb_002811_260 Hb_175215_010 Hb_175215_010 Hb_128048_010--Hb_175215_010 Hb_181288_010 Hb_181288_010 Hb_128048_010--Hb_181288_010 Hb_002893_050 Hb_002893_050 Hb_007875_030--Hb_002893_050 Hb_000610_050 Hb_000610_050 Hb_007875_030--Hb_000610_050 Hb_024071_020 Hb_024071_020 Hb_007875_030--Hb_024071_020 Hb_001047_240 Hb_001047_240 Hb_007875_030--Hb_001047_240 Hb_001140_370 Hb_001140_370 Hb_007875_030--Hb_001140_370 Hb_001016_030--Hb_001140_370 Hb_001616_040 Hb_001616_040 Hb_001016_030--Hb_001616_040 Hb_000201_120 Hb_000201_120 Hb_001016_030--Hb_000201_120 Hb_001421_060 Hb_001421_060 Hb_001016_030--Hb_001421_060 Hb_003126_090 Hb_003126_090 Hb_001016_030--Hb_003126_090 Hb_002830_020 Hb_002830_020 Hb_001016_030--Hb_002830_020 Hb_019249_010--Hb_181288_010 Hb_019249_010--Hb_128048_010 Hb_001817_090 Hb_001817_090 Hb_019249_010--Hb_001817_090 Hb_019249_010--Hb_003878_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.6291 8.58858 20.7271 26.69 16.6775 34.0001
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
49.8929 48.4274 12.8249 14.8535 10.4548

CAGE analysis