Hb_001824_010

Information

Type -
Description -
Location Contig1824: 19238-23898
Sequence    

Annotation

kegg
ID rcu:RCOM_1612190
description glutathione-s-transferase theta, gst, putative (EC:5.2.1.2)
nr
ID XP_002511721.1
description glutathione-s-transferase theta, gst, putative [Ricinus communis]
swissprot
ID P57108
description Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1
trembl
ID B9RDD2
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_1612190 PE=3 SV=1
Gene Ontology
ID GO:0005737
description glutathione s-transferase zeta class-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17775: 19381-23724
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001824_010 0.0 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
2 Hb_008695_040 0.0781654416 - - PREDICTED: small ribosomal subunit protein S13, mitochondrial-like [Jatropha curcas]
3 Hb_001421_060 0.0828308729 - - PREDICTED: tobamovirus multiplication protein 2B isoform X2 [Jatropha curcas]
4 Hb_076693_030 0.0842314648 - - PREDICTED: serine/arginine-rich-splicing factor SR34-like [Populus euphratica]
5 Hb_002596_040 0.0874816611 - - PREDICTED: uncharacterized protein LOC105645264 isoform X2 [Jatropha curcas]
6 Hb_000840_190 0.0930152371 - - 60S ribosomal protein L10, mitochondrial, putative [Ricinus communis]
7 Hb_008699_020 0.0931360293 - - eukaryotic translation initiation factor 5A isoform IV [Hevea brasiliensis]
8 Hb_001047_240 0.0971993473 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
9 Hb_001054_100 0.0973283773 - - PREDICTED: uncharacterized protein LOC105634642 [Jatropha curcas]
10 Hb_005736_060 0.0975348226 - - PREDICTED: ribosome maturation protein SBDS [Jatropha curcas]
11 Hb_020400_050 0.1007059185 - - PREDICTED: uncharacterized protein At5g19025-like isoform X1 [Populus euphratica]
12 Hb_001653_020 0.1034900029 transcription factor TF Family: C2H2 rar1, putative [Ricinus communis]
13 Hb_008695_050 0.1041827543 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006816_530 0.1052766095 - - 60S ribosomal protein L18, putative [Ricinus communis]
15 Hb_000373_120 0.1073614864 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
16 Hb_002061_040 0.1077718632 - - PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]
17 Hb_000135_060 0.1078660876 transcription factor TF Family: MED6 PREDICTED: mediator of RNA polymerase II transcription subunit 6 [Jatropha curcas]
18 Hb_002805_220 0.1088531909 - - PREDICTED: 60S ribosomal protein L2, mitochondrial [Jatropha curcas]
19 Hb_032717_080 0.1093126373 - - gamma-soluble nsf attachment protein, putative [Ricinus communis]
20 Hb_000331_450 0.10931487 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_001824_010 Hb_001824_010 Hb_008695_040 Hb_008695_040 Hb_001824_010--Hb_008695_040 Hb_001421_060 Hb_001421_060 Hb_001824_010--Hb_001421_060 Hb_076693_030 Hb_076693_030 Hb_001824_010--Hb_076693_030 Hb_002596_040 Hb_002596_040 Hb_001824_010--Hb_002596_040 Hb_000840_190 Hb_000840_190 Hb_001824_010--Hb_000840_190 Hb_008699_020 Hb_008699_020 Hb_001824_010--Hb_008699_020 Hb_008695_040--Hb_000840_190 Hb_008695_040--Hb_001421_060 Hb_008695_040--Hb_002596_040 Hb_008695_040--Hb_076693_030 Hb_002805_220 Hb_002805_220 Hb_008695_040--Hb_002805_220 Hb_003599_040 Hb_003599_040 Hb_001421_060--Hb_003599_040 Hb_000373_120 Hb_000373_120 Hb_001421_060--Hb_000373_120 Hb_001016_030 Hb_001016_030 Hb_001421_060--Hb_001016_030 Hb_000103_090 Hb_000103_090 Hb_001421_060--Hb_000103_090 Hb_006816_530 Hb_006816_530 Hb_001421_060--Hb_006816_530 Hb_015807_040 Hb_015807_040 Hb_001421_060--Hb_015807_040 Hb_001047_240 Hb_001047_240 Hb_076693_030--Hb_001047_240 Hb_076693_030--Hb_002596_040 Hb_007875_030 Hb_007875_030 Hb_076693_030--Hb_007875_030 Hb_007735_030 Hb_007735_030 Hb_076693_030--Hb_007735_030 Hb_002296_040 Hb_002296_040 Hb_002596_040--Hb_002296_040 Hb_002596_040--Hb_001421_060 Hb_010180_010 Hb_010180_010 Hb_002596_040--Hb_010180_010 Hb_002662_030 Hb_002662_030 Hb_002596_040--Hb_002662_030 Hb_010883_150 Hb_010883_150 Hb_000840_190--Hb_010883_150 Hb_046157_020 Hb_046157_020 Hb_000840_190--Hb_046157_020 Hb_000840_190--Hb_001421_060 Hb_000086_550 Hb_000086_550 Hb_000840_190--Hb_000086_550 Hb_000820_130 Hb_000820_130 Hb_008699_020--Hb_000820_130 Hb_002107_120 Hb_002107_120 Hb_008699_020--Hb_002107_120 Hb_001700_020 Hb_001700_020 Hb_008699_020--Hb_001700_020 Hb_000212_470 Hb_000212_470 Hb_008699_020--Hb_000212_470 Hb_007304_070 Hb_007304_070 Hb_008699_020--Hb_007304_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.521 5.28535 5.39488 14.7838 9.61622 15.426
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.9809 28.1526 12.0808 17.6786 6.44973

CAGE analysis