Hb_001824_080

Information

Type -
Description -
Location Contig1824: 89395-91253
Sequence    

Annotation

kegg
ID pop:POPTR_0015s06600g
description hypothetical protein
nr
ID XP_012092920.1
description PREDICTED: 2-aminoethanethiol dioxygenase isoform X1 [Jatropha curcas]
swissprot
ID Q1G3U6
description Plant cysteine oxidase 3 OS=Arabidopsis thaliana GN=PCO3 PE=1 SV=1
trembl
ID A0A067J8M8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05821 PE=4 SV=1
Gene Ontology
ID GO:0047800
description 2-aminoethanethiol dioxygenase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17782: 89235-104830
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001824_080 0.0 - - PREDICTED: 2-aminoethanethiol dioxygenase isoform X1 [Jatropha curcas]
2 Hb_004109_120 0.0629988904 - - PREDICTED: kinesin-related protein 6 isoform X1 [Jatropha curcas]
3 Hb_000254_100 0.0649248395 - - PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2 [Jatropha curcas]
4 Hb_004109_260 0.0679689506 - - hypothetical protein JCGZ_06843 [Jatropha curcas]
5 Hb_000304_070 0.0730175452 - - non-canonical ubiquitin conjugating enzyme, putative [Ricinus communis]
6 Hb_004339_040 0.0778625589 - - hypothetical protein POPTR_0162s00290g, partial [Populus trichocarpa]
7 Hb_007821_020 0.0806837965 - - PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467 isoform X2 [Jatropha curcas]
8 Hb_000880_070 0.0807150294 - - gamma-tubulin complex component, putative [Ricinus communis]
9 Hb_000207_300 0.0835926335 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic-like [Jatropha curcas]
10 Hb_001703_040 0.0858344032 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
11 Hb_000416_200 0.0868551733 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
12 Hb_170416_010 0.0868698974 - - PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Jatropha curcas]
13 Hb_005162_110 0.0870939814 - - PREDICTED: uncharacterized protein LOC105648430 [Jatropha curcas]
14 Hb_000567_070 0.0893446442 - - autophagy protein, putative [Ricinus communis]
15 Hb_007765_100 0.0894754628 - - PREDICTED: helicase SKI2W [Jatropha curcas]
16 Hb_000300_180 0.0900735347 - - transcription initiation factor brf1, putative [Ricinus communis]
17 Hb_012438_030 0.0906496023 - - PREDICTED: protein sym-1 [Jatropha curcas]
18 Hb_000676_070 0.0911927109 - - PREDICTED: uncharacterized protein LOC105634617 [Jatropha curcas]
19 Hb_000757_030 0.0916380423 - - radical sam protein, putative [Ricinus communis]
20 Hb_031284_010 0.0923959836 - - PREDICTED: uncharacterized protein LOC105633543 [Jatropha curcas]

Gene co-expression network

sample Hb_001824_080 Hb_001824_080 Hb_004109_120 Hb_004109_120 Hb_001824_080--Hb_004109_120 Hb_000254_100 Hb_000254_100 Hb_001824_080--Hb_000254_100 Hb_004109_260 Hb_004109_260 Hb_001824_080--Hb_004109_260 Hb_000304_070 Hb_000304_070 Hb_001824_080--Hb_000304_070 Hb_004339_040 Hb_004339_040 Hb_001824_080--Hb_004339_040 Hb_007821_020 Hb_007821_020 Hb_001824_080--Hb_007821_020 Hb_000207_300 Hb_000207_300 Hb_004109_120--Hb_000207_300 Hb_004109_120--Hb_000254_100 Hb_000724_020 Hb_000724_020 Hb_004109_120--Hb_000724_020 Hb_001158_160 Hb_001158_160 Hb_004109_120--Hb_001158_160 Hb_004109_120--Hb_004339_040 Hb_000847_080 Hb_000847_080 Hb_000254_100--Hb_000847_080 Hb_030414_040 Hb_030414_040 Hb_000254_100--Hb_030414_040 Hb_000567_070 Hb_000567_070 Hb_000254_100--Hb_000567_070 Hb_003186_020 Hb_003186_020 Hb_000254_100--Hb_003186_020 Hb_004109_260--Hb_004339_040 Hb_000802_130 Hb_000802_130 Hb_004109_260--Hb_000802_130 Hb_000613_120 Hb_000613_120 Hb_004109_260--Hb_000613_120 Hb_001438_010 Hb_001438_010 Hb_004109_260--Hb_001438_010 Hb_000880_070 Hb_000880_070 Hb_004109_260--Hb_000880_070 Hb_010863_050 Hb_010863_050 Hb_000304_070--Hb_010863_050 Hb_001623_270 Hb_001623_270 Hb_000304_070--Hb_001623_270 Hb_005588_080 Hb_005588_080 Hb_000304_070--Hb_005588_080 Hb_000304_070--Hb_000254_100 Hb_000304_070--Hb_000207_300 Hb_004339_040--Hb_000880_070 Hb_001623_500 Hb_001623_500 Hb_004339_040--Hb_001623_500 Hb_005946_040 Hb_005946_040 Hb_004339_040--Hb_005946_040 Hb_007821_020--Hb_000567_070 Hb_007821_020--Hb_000254_100 Hb_003225_020 Hb_003225_020 Hb_007821_020--Hb_003225_020 Hb_000115_280 Hb_000115_280 Hb_007821_020--Hb_000115_280 Hb_031284_010 Hb_031284_010 Hb_007821_020--Hb_031284_010 Hb_007821_020--Hb_003186_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.32175 9.35392 26.2319 11.1774 13.0787 10.5268
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.43884 9.23093 11.9186 11.239 21.9198

CAGE analysis