Hb_001832_010

Information

Type -
Description -
Location Contig1832: 6341-16314
Sequence    

Annotation

kegg
ID rcu:RCOM_1047030
description valacyclovir hydrolase, putative
nr
ID XP_012076944.1
description PREDICTED: uncharacterized protein LOC105637890 isoform X1 [Jatropha curcas]
swissprot
ID Q07379
description Putative uncharacterized protein YDL057W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL057W PE=4 SV=1
trembl
ID A0A067KPV3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07415 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta-hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17880: 6673-16338 , PASA_asmbl_17881: 15001-15351 , PASA_asmbl_17882: 6653-16189
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001832_010 0.0 - - PREDICTED: uncharacterized protein LOC105637890 isoform X1 [Jatropha curcas]
2 Hb_001833_110 0.0704706913 - - conserved hypothetical protein [Ricinus communis]
3 Hb_015807_040 0.070624275 - - PREDICTED: polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Jatropha curcas]
4 Hb_000668_040 0.0767141436 - - PREDICTED: random slug protein 5-like [Jatropha curcas]
5 Hb_004724_340 0.0784619302 - - PREDICTED: mitochondrial fission protein ELM1 [Jatropha curcas]
6 Hb_001360_050 0.0793739503 - - PREDICTED: probable helicase MAGATAMA 3 isoform X1 [Jatropha curcas]
7 Hb_004837_140 0.0814178396 - - hypothetical protein PRUPE_ppa012469mg [Prunus persica]
8 Hb_000061_320 0.0837100982 - - PREDICTED: uncharacterized protein LOC105640575 isoform X1 [Jatropha curcas]
9 Hb_000010_460 0.0837277528 - - hypothetical protein EUGRSUZ_B001502, partial [Eucalyptus grandis]
10 Hb_010080_090 0.0854116426 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Jatropha curcas]
11 Hb_002963_010 0.0866168516 - - PREDICTED: autophagy-related protein 18b-like isoform X1 [Jatropha curcas]
12 Hb_032717_080 0.0875734327 - - gamma-soluble nsf attachment protein, putative [Ricinus communis]
13 Hb_026527_030 0.0882379377 - - PREDICTED: general transcription factor IIE subunit 1-like isoform X1 [Jatropha curcas]
14 Hb_003599_040 0.0893775264 - - unnamed protein product [Vitis vinifera]
15 Hb_012053_070 0.0897594297 - - PREDICTED: uncharacterized protein LOC105637344 [Jatropha curcas]
16 Hb_000025_120 0.0900544266 - - PREDICTED: uncharacterized protein LOC105628946 isoform X1 [Jatropha curcas]
17 Hb_000373_120 0.0912231243 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
18 Hb_024185_020 0.0917018594 - - -
19 Hb_012338_010 0.0927187889 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003175_040 0.0931445363 - - PREDICTED: katanin p60 ATPase-containing subunit A1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001832_010 Hb_001832_010 Hb_001833_110 Hb_001833_110 Hb_001832_010--Hb_001833_110 Hb_015807_040 Hb_015807_040 Hb_001832_010--Hb_015807_040 Hb_000668_040 Hb_000668_040 Hb_001832_010--Hb_000668_040 Hb_004724_340 Hb_004724_340 Hb_001832_010--Hb_004724_340 Hb_001360_050 Hb_001360_050 Hb_001832_010--Hb_001360_050 Hb_004837_140 Hb_004837_140 Hb_001832_010--Hb_004837_140 Hb_002759_060 Hb_002759_060 Hb_001833_110--Hb_002759_060 Hb_001833_110--Hb_001360_050 Hb_001833_110--Hb_015807_040 Hb_001833_110--Hb_004724_340 Hb_000041_050 Hb_000041_050 Hb_001833_110--Hb_000041_050 Hb_000331_450 Hb_000331_450 Hb_015807_040--Hb_000331_450 Hb_010042_010 Hb_010042_010 Hb_015807_040--Hb_010042_010 Hb_006816_210 Hb_006816_210 Hb_015807_040--Hb_006816_210 Hb_159809_020 Hb_159809_020 Hb_015807_040--Hb_159809_020 Hb_000201_120 Hb_000201_120 Hb_000668_040--Hb_000201_120 Hb_000680_140 Hb_000680_140 Hb_000668_040--Hb_000680_140 Hb_001396_100 Hb_001396_100 Hb_000668_040--Hb_001396_100 Hb_002016_100 Hb_002016_100 Hb_000668_040--Hb_002016_100 Hb_010080_090 Hb_010080_090 Hb_000668_040--Hb_010080_090 Hb_004724_340--Hb_001360_050 Hb_004724_340--Hb_010080_090 Hb_012675_060 Hb_012675_060 Hb_004724_340--Hb_012675_060 Hb_000347_410 Hb_000347_410 Hb_004724_340--Hb_000347_410 Hb_002471_080 Hb_002471_080 Hb_004724_340--Hb_002471_080 Hb_001360_050--Hb_002471_080 Hb_005092_060 Hb_005092_060 Hb_001360_050--Hb_005092_060 Hb_001360_050--Hb_002759_060 Hb_001360_050--Hb_012675_060 Hb_000170_010 Hb_000170_010 Hb_004837_140--Hb_000170_010 Hb_002918_200 Hb_002918_200 Hb_004837_140--Hb_002918_200 Hb_002963_010 Hb_002963_010 Hb_004837_140--Hb_002963_010 Hb_004108_230 Hb_004108_230 Hb_004837_140--Hb_004108_230 Hb_005997_010 Hb_005997_010 Hb_004837_140--Hb_005997_010 Hb_012338_010 Hb_012338_010 Hb_004837_140--Hb_012338_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
39.4529 11.9344 20.2092 26.8702 45.429 43.4554
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
106.186 76.6229 58.6652 41.0418 23.5196

CAGE analysis