Hb_001832_070

Information

Type -
Description -
Location Contig1832: 60572-61294
Sequence    

Annotation

kegg
ID rcu:RCOM_1046970
description hypothetical protein
nr
ID XP_012076941.1
description PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPU9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07410 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001832_070 0.0 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
2 Hb_001189_150 0.102438852 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
3 Hb_000836_220 0.1108693651 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_000186_320 0.1212636993 - - receptor protein kinase, putative [Ricinus communis]
5 Hb_096930_010 0.1222994358 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
6 Hb_001198_160 0.1317044115 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
7 Hb_000028_330 0.1318021472 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
8 Hb_001610_070 0.1346889362 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
9 Hb_010721_010 0.1366204962 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
10 Hb_003864_020 0.1424104986 - - kinase, putative [Ricinus communis]
11 Hb_001663_090 0.1425219471 - - ribonuclease t2, putative [Ricinus communis]
12 Hb_002048_070 0.1441088752 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
13 Hb_029622_090 0.1454227284 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
14 Hb_177215_020 0.1500161313 - - acc synthase, putative [Ricinus communis]
15 Hb_023386_060 0.1517233293 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
16 Hb_012272_010 0.1517660673 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
17 Hb_001310_080 0.1558866071 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
18 Hb_026048_030 0.1576071206 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002676_110 0.1579767172 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
20 Hb_001247_160 0.1580649799 - - s-adenosylmethionine synthetase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001832_070 Hb_001832_070 Hb_001189_150 Hb_001189_150 Hb_001832_070--Hb_001189_150 Hb_000836_220 Hb_000836_220 Hb_001832_070--Hb_000836_220 Hb_000186_320 Hb_000186_320 Hb_001832_070--Hb_000186_320 Hb_096930_010 Hb_096930_010 Hb_001832_070--Hb_096930_010 Hb_001198_160 Hb_001198_160 Hb_001832_070--Hb_001198_160 Hb_000028_330 Hb_000028_330 Hb_001832_070--Hb_000028_330 Hb_000521_100 Hb_000521_100 Hb_001189_150--Hb_000521_100 Hb_012272_010 Hb_012272_010 Hb_001189_150--Hb_012272_010 Hb_003633_150 Hb_003633_150 Hb_001189_150--Hb_003633_150 Hb_001189_150--Hb_000836_220 Hb_003864_020 Hb_003864_020 Hb_001189_150--Hb_003864_020 Hb_000836_220--Hb_001198_160 Hb_002370_060 Hb_002370_060 Hb_000836_220--Hb_002370_060 Hb_000054_140 Hb_000054_140 Hb_000836_220--Hb_000054_140 Hb_177215_020 Hb_177215_020 Hb_000836_220--Hb_177215_020 Hb_006573_280 Hb_006573_280 Hb_000836_220--Hb_006573_280 Hb_000836_220--Hb_000028_330 Hb_021576_160 Hb_021576_160 Hb_000186_320--Hb_021576_160 Hb_001221_050 Hb_001221_050 Hb_000186_320--Hb_001221_050 Hb_001610_070 Hb_001610_070 Hb_000186_320--Hb_001610_070 Hb_029622_090 Hb_029622_090 Hb_000186_320--Hb_029622_090 Hb_000186_320--Hb_000028_330 Hb_000925_110 Hb_000925_110 Hb_096930_010--Hb_000925_110 Hb_000656_350 Hb_000656_350 Hb_096930_010--Hb_000656_350 Hb_004724_310 Hb_004724_310 Hb_096930_010--Hb_004724_310 Hb_032260_100 Hb_032260_100 Hb_096930_010--Hb_032260_100 Hb_001310_080 Hb_001310_080 Hb_096930_010--Hb_001310_080 Hb_096930_010--Hb_000836_220 Hb_001198_160--Hb_000028_330 Hb_001198_160--Hb_001610_070 Hb_001198_160--Hb_177215_020 Hb_138086_010 Hb_138086_010 Hb_001198_160--Hb_138086_010 Hb_001198_160--Hb_000054_140 Hb_000028_330--Hb_001610_070 Hb_006736_040 Hb_006736_040 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.93526 1.6015 2.27941 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.154734 0 0 0.395422 0.241533

CAGE analysis