Hb_001832_210

Information

Type -
Description -
Location Contig1832: 227428-228885
Sequence    

Annotation

kegg
ID rcu:RCOM_1046730
description ectonucleotide pyrophosphatase/phosphodiesterase, putative (EC:3.1.4.1)
nr
ID XP_012076912.1
description PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
swissprot
ID J3SEZ3
description Venom phosphodiesterase 1 OS=Crotalus adamanteus PE=1 SV=2
trembl
ID A0A067KNG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07396 PE=4 SV=1
Gene Ontology
ID GO:0003824
description ectonucleotide pyrophosphatase phosphodiesterase family member 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17916: 227224-243295
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001832_210 0.0 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
2 Hb_001071_060 0.0992984719 - - Trehalose phosphatase/synthase 5 isoform 1 [Theobroma cacao]
3 Hb_000000_110 0.1105332063 - - hypothetical protein CISIN_1g0027772mg, partial [Citrus sinensis]
4 Hb_000197_230 0.1110326588 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
5 Hb_000997_340 0.1172505801 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
6 Hb_000220_080 0.1188673482 - - kinase, putative [Ricinus communis]
7 Hb_000085_380 0.1253146353 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001898_020 0.1274464531 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
9 Hb_012727_010 0.1279760226 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
10 Hb_001522_040 0.1314247187 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_000120_310 0.1316892303 - - Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
12 Hb_002833_020 0.1322123408 desease resistance Gene Name: LRR_4 PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
13 Hb_005016_020 0.1343790315 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
14 Hb_004531_110 0.1349500944 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
15 Hb_052117_010 0.1351870766 - - kinase, putative [Ricinus communis]
16 Hb_001596_020 0.135526564 - - hypothetical protein CICLE_v10014140mg [Citrus clementina]
17 Hb_001369_160 0.1364574862 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
18 Hb_006831_080 0.1371615498 - - PREDICTED: uncharacterized protein LOC105642126 [Jatropha curcas]
19 Hb_000793_040 0.1375392252 - - PREDICTED: transcription factor LHW [Jatropha curcas]
20 Hb_000100_210 0.1384155004 - - PREDICTED: selenium-binding protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001832_210 Hb_001832_210 Hb_001071_060 Hb_001071_060 Hb_001832_210--Hb_001071_060 Hb_000000_110 Hb_000000_110 Hb_001832_210--Hb_000000_110 Hb_000197_230 Hb_000197_230 Hb_001832_210--Hb_000197_230 Hb_000997_340 Hb_000997_340 Hb_001832_210--Hb_000997_340 Hb_000220_080 Hb_000220_080 Hb_001832_210--Hb_000220_080 Hb_000085_380 Hb_000085_380 Hb_001832_210--Hb_000085_380 Hb_001071_060--Hb_000197_230 Hb_004531_110 Hb_004531_110 Hb_001071_060--Hb_004531_110 Hb_064047_010 Hb_064047_010 Hb_001071_060--Hb_064047_010 Hb_000778_020 Hb_000778_020 Hb_001071_060--Hb_000778_020 Hb_002324_040 Hb_002324_040 Hb_001071_060--Hb_002324_040 Hb_005016_020 Hb_005016_020 Hb_000000_110--Hb_005016_020 Hb_000000_110--Hb_000220_080 Hb_001178_080 Hb_001178_080 Hb_000000_110--Hb_001178_080 Hb_000000_120 Hb_000000_120 Hb_000000_110--Hb_000000_120 Hb_002685_030 Hb_002685_030 Hb_000000_110--Hb_002685_030 Hb_010605_010 Hb_010605_010 Hb_000197_230--Hb_010605_010 Hb_002833_020 Hb_002833_020 Hb_000197_230--Hb_002833_020 Hb_000100_210 Hb_000100_210 Hb_000197_230--Hb_000100_210 Hb_001391_100 Hb_001391_100 Hb_000197_230--Hb_001391_100 Hb_000997_340--Hb_000100_210 Hb_052117_010 Hb_052117_010 Hb_000997_340--Hb_052117_010 Hb_001522_040 Hb_001522_040 Hb_000997_340--Hb_001522_040 Hb_001898_020 Hb_001898_020 Hb_000997_340--Hb_001898_020 Hb_000950_040 Hb_000950_040 Hb_000997_340--Hb_000950_040 Hb_000220_080--Hb_000000_120 Hb_002316_170 Hb_002316_170 Hb_000220_080--Hb_002316_170 Hb_000072_020 Hb_000072_020 Hb_000220_080--Hb_000072_020 Hb_001009_150 Hb_001009_150 Hb_000220_080--Hb_001009_150 Hb_006949_060 Hb_006949_060 Hb_000220_080--Hb_006949_060 Hb_000085_380--Hb_002833_020 Hb_000318_170 Hb_000318_170 Hb_000085_380--Hb_000318_170 Hb_001221_390 Hb_001221_390 Hb_000085_380--Hb_001221_390 Hb_001008_110 Hb_001008_110 Hb_000085_380--Hb_001008_110 Hb_033234_010 Hb_033234_010 Hb_000085_380--Hb_033234_010 Hb_003106_110 Hb_003106_110 Hb_000085_380--Hb_003106_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.95696 45.7913 18.8484 51.871 6.25654 5.84397
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.41985 0.939307 0.905228 40.9043 19.7331

CAGE analysis