Hb_001842_070

Information

Type -
Description -
Location Contig1842: 120174-131202
Sequence    

Annotation

kegg
ID rcu:RCOM_0792940
description hypothetical protein
nr
ID XP_012075898.1
description PREDICTED: uncharacterized protein LOC105637106 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KF33
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10907 PE=4 SV=1
Gene Ontology
ID GO:0031047
description PREDICTED: uncharacterized protein LOC105637106

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001842_070 0.0 - - PREDICTED: uncharacterized protein LOC105637106 [Jatropha curcas]
2 Hb_007760_030 0.082096113 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]
3 Hb_011224_080 0.0885555652 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
4 Hb_000317_430 0.0904964491 transcription factor TF Family: SET PREDICTED: ribosomal lysine N-methyltransferase 3 [Jatropha curcas]
5 Hb_000365_360 0.0935042709 - - PREDICTED: RING finger and transmembrane domain-containing protein 2 isoform X1 [Jatropha curcas]
6 Hb_063134_010 0.0939893949 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
7 Hb_006693_030 0.0964158889 - - PREDICTED: ribonuclease H2 subunit A [Jatropha curcas]
8 Hb_033594_130 0.0971018141 - - PREDICTED: 50S ribosomal protein L12, cyanelle-like [Jatropha curcas]
9 Hb_118419_020 0.0973707385 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Vitis vinifera]
10 Hb_007193_100 0.1032464507 - - syntaxin family protein [Populus trichocarpa]
11 Hb_162275_010 0.1050209147 - - -
12 Hb_000175_070 0.1078375686 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Jatropha curcas]
13 Hb_000084_310 0.1092180748 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
14 Hb_098709_010 0.109903784 - - PREDICTED: protein argonaute 1 [Jatropha curcas]
15 Hb_029510_140 0.1103229724 - - PREDICTED: uncharacterized protein LOC105635017 [Jatropha curcas]
16 Hb_000035_380 0.1126585094 - - -
17 Hb_001902_050 0.1128374946 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105648450 [Jatropha curcas]
18 Hb_000576_030 0.113002676 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Jatropha curcas]
19 Hb_000173_170 0.1150735591 - - PREDICTED: UPF0613 protein PB24D3.06c [Jatropha curcas]
20 Hb_001135_160 0.1154105541 - - PREDICTED: elongator complex protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_001842_070 Hb_001842_070 Hb_007760_030 Hb_007760_030 Hb_001842_070--Hb_007760_030 Hb_011224_080 Hb_011224_080 Hb_001842_070--Hb_011224_080 Hb_000317_430 Hb_000317_430 Hb_001842_070--Hb_000317_430 Hb_000365_360 Hb_000365_360 Hb_001842_070--Hb_000365_360 Hb_063134_010 Hb_063134_010 Hb_001842_070--Hb_063134_010 Hb_006693_030 Hb_006693_030 Hb_001842_070--Hb_006693_030 Hb_000173_170 Hb_000173_170 Hb_007760_030--Hb_000173_170 Hb_007152_020 Hb_007152_020 Hb_007760_030--Hb_007152_020 Hb_000025_480 Hb_000025_480 Hb_007760_030--Hb_000025_480 Hb_007760_030--Hb_006693_030 Hb_007760_030--Hb_011224_080 Hb_011224_080--Hb_006693_030 Hb_000029_030 Hb_000029_030 Hb_011224_080--Hb_000029_030 Hb_002368_050 Hb_002368_050 Hb_011224_080--Hb_002368_050 Hb_002659_140 Hb_002659_140 Hb_011224_080--Hb_002659_140 Hb_168918_020 Hb_168918_020 Hb_011224_080--Hb_168918_020 Hb_000556_080 Hb_000556_080 Hb_011224_080--Hb_000556_080 Hb_000035_380 Hb_000035_380 Hb_000317_430--Hb_000035_380 Hb_000175_070 Hb_000175_070 Hb_000317_430--Hb_000175_070 Hb_118419_020 Hb_118419_020 Hb_000317_430--Hb_118419_020 Hb_060809_010 Hb_060809_010 Hb_000317_430--Hb_060809_010 Hb_000317_430--Hb_000365_360 Hb_007193_100 Hb_007193_100 Hb_000317_430--Hb_007193_100 Hb_098709_010 Hb_098709_010 Hb_000365_360--Hb_098709_010 Hb_001369_060 Hb_001369_060 Hb_000365_360--Hb_001369_060 Hb_002014_080 Hb_002014_080 Hb_000365_360--Hb_002014_080 Hb_000365_360--Hb_000035_380 Hb_000365_360--Hb_118419_020 Hb_063134_010--Hb_007193_100 Hb_029510_140 Hb_029510_140 Hb_063134_010--Hb_029510_140 Hb_003005_020 Hb_003005_020 Hb_063134_010--Hb_003005_020 Hb_063134_010--Hb_000175_070 Hb_000172_370 Hb_000172_370 Hb_063134_010--Hb_000172_370 Hb_000384_090 Hb_000384_090 Hb_063134_010--Hb_000384_090 Hb_000956_010 Hb_000956_010 Hb_006693_030--Hb_000956_010 Hb_006693_030--Hb_002368_050 Hb_004899_320 Hb_004899_320 Hb_006693_030--Hb_004899_320 Hb_006693_030--Hb_000029_030 Hb_004662_030 Hb_004662_030 Hb_006693_030--Hb_004662_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.9217 0.937673 1.68219 1.6529 11.5396 17.8651
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0373 13.0994 12.4171 2.94029 3.07708

CAGE analysis