Hb_001846_030

Information

Type -
Description -
Location Contig1846: 79940-81460
Sequence    

Annotation

kegg
ID rcu:RCOM_0992970
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012092083.1
description PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
swissprot
ID Q9FMV7
description Cytochrome P450 94B1 OS=Arabidopsis thaliana GN=CYP94B1 PE=2 SV=1
trembl
ID A0A067JMV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21816 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp94a1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001846_030 0.0 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
2 Hb_008948_070 0.0811930283 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
3 Hb_032071_010 0.0973031128 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
4 Hb_006478_140 0.1117275208 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
5 Hb_012022_020 0.1125775863 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
6 Hb_017693_040 0.1167490627 - - tyrosine kinase family protein [Medicago truncatula]
7 Hb_000192_030 0.1304910097 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
8 Hb_001405_250 0.1333900235 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
9 Hb_074672_010 0.1375810651 - - receptor serine/threonine kinase, putative [Ricinus communis]
10 Hb_000953_180 0.1390519973 - - -
11 Hb_006395_020 0.1397377484 - - hypothetical protein RCOM_0725510 [Ricinus communis]
12 Hb_000302_150 0.1434899197 transcription factor TF Family: WRKY hypothetical protein RCOM_1581940 [Ricinus communis]
13 Hb_030903_020 0.1456065937 - - PREDICTED: putative 12-oxophytodienoate reductase 11 [Jatropha curcas]
14 Hb_067028_010 0.1544163584 - - BnaC03g72040D [Brassica napus]
15 Hb_077694_010 0.1546194092 - - uncharacterized protein LOC100305624 [Glycine max]
16 Hb_120011_010 0.1548426988 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_002289_180 0.1549873194 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
18 Hb_112703_010 0.1589057725 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
19 Hb_008651_010 0.1601642177 - - cytochrome P450, putative [Ricinus communis]
20 Hb_158111_010 0.1603269888 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001846_030 Hb_001846_030 Hb_008948_070 Hb_008948_070 Hb_001846_030--Hb_008948_070 Hb_032071_010 Hb_032071_010 Hb_001846_030--Hb_032071_010 Hb_006478_140 Hb_006478_140 Hb_001846_030--Hb_006478_140 Hb_012022_020 Hb_012022_020 Hb_001846_030--Hb_012022_020 Hb_017693_040 Hb_017693_040 Hb_001846_030--Hb_017693_040 Hb_000192_030 Hb_000192_030 Hb_001846_030--Hb_000192_030 Hb_000953_180 Hb_000953_180 Hb_008948_070--Hb_000953_180 Hb_008948_070--Hb_000192_030 Hb_096974_010 Hb_096974_010 Hb_008948_070--Hb_096974_010 Hb_008948_070--Hb_006478_140 Hb_000365_110 Hb_000365_110 Hb_008948_070--Hb_000365_110 Hb_002289_180 Hb_002289_180 Hb_032071_010--Hb_002289_180 Hb_112703_010 Hb_112703_010 Hb_032071_010--Hb_112703_010 Hb_008651_010 Hb_008651_010 Hb_032071_010--Hb_008651_010 Hb_179363_010 Hb_179363_010 Hb_032071_010--Hb_179363_010 Hb_000997_130 Hb_000997_130 Hb_032071_010--Hb_000997_130 Hb_000604_080 Hb_000604_080 Hb_006478_140--Hb_000604_080 Hb_006478_140--Hb_000953_180 Hb_127372_010 Hb_127372_010 Hb_006478_140--Hb_127372_010 Hb_011622_010 Hb_011622_010 Hb_006478_140--Hb_011622_010 Hb_012022_020--Hb_017693_040 Hb_000069_530 Hb_000069_530 Hb_012022_020--Hb_000069_530 Hb_012022_020--Hb_032071_010 Hb_120011_010 Hb_120011_010 Hb_012022_020--Hb_120011_010 Hb_077694_010 Hb_077694_010 Hb_012022_020--Hb_077694_010 Hb_017693_040--Hb_077694_010 Hb_121540_010 Hb_121540_010 Hb_017693_040--Hb_121540_010 Hb_000087_200 Hb_000087_200 Hb_017693_040--Hb_000087_200 Hb_001635_230 Hb_001635_230 Hb_017693_040--Hb_001635_230 Hb_000359_260 Hb_000359_260 Hb_017693_040--Hb_000359_260 Hb_000192_030--Hb_000953_180 Hb_100395_010 Hb_100395_010 Hb_000192_030--Hb_100395_010 Hb_010223_010 Hb_010223_010 Hb_000192_030--Hb_010223_010 Hb_000192_030--Hb_000365_110 Hb_107174_010 Hb_107174_010 Hb_000192_030--Hb_107174_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.46541 6.16057 1.46048 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.588622 0

CAGE analysis