Hb_001862_030

Information

Type -
Description -
Location Contig1862: 37629-39281
Sequence    

Annotation

kegg
ID pop:POPTR_0007s10200g
description hydrolase family protein
nr
ID XP_012079355.1
description PREDICTED: probable esterase KAI2 [Jatropha curcas]
swissprot
ID Q9SZU7
description Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1
trembl
ID A0A067KID5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12496 PE=4 SV=1
Gene Ontology
ID GO:0052689
description probable esterase kai2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18273: 37509-39321 , PASA_asmbl_18275: 38011-38155
cDNA
(Sanger)
(ID:Location)		 002_K09.ab1: 37610-38992 , 014_O12.ab1: 37610-38980 , 016_D14.ab1: 37615-38895 , 019_I11.ab1: 37509-38817 , 023_J23.ab1: 37615-38955 , 025_D07.ab1: 37509-38902 , 025_D09.ab1: 37592-38951 , 033_K02.ab1: 37615-38866 , 049_N07.ab1: 37615-38851

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001862_030 0.0 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
2 Hb_003667_020 0.1097440624 - - conserved hypothetical protein 16 [Hevea brasiliensis]
3 Hb_002463_050 0.133516322 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000165_090 0.1387267694 - - PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 2-like [Jatropha curcas]
5 Hb_000809_130 0.1391876196 - - PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]
6 Hb_001541_190 0.1458757068 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
7 Hb_001307_020 0.1503841776 - - electron carrier, putative [Ricinus communis]
8 Hb_004712_090 0.1537089841 - - Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]
9 Hb_001638_120 0.1562738654 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 9 [Jatropha curcas]
10 Hb_000905_100 0.1590264739 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
11 Hb_008250_020 0.159763983 - - PREDICTED: U-box domain-containing protein 15-like isoform X1 [Jatropha curcas]
12 Hb_000996_040 0.1600293341 - - hypothetical protein POPTR_0003s12500g [Populus trichocarpa]
13 Hb_004223_080 0.1613187327 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
14 Hb_011918_030 0.1635301291 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
15 Hb_000395_120 0.1635451346 - - Stellacyanin, putative [Ricinus communis]
16 Hb_002639_050 0.1648147793 - - multicopper oxidase, putative [Ricinus communis]
17 Hb_000836_090 0.1711770685 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
18 Hb_001366_390 0.1730427112 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
19 Hb_006153_010 0.1734911968 - - PREDICTED: monocopper oxidase-like protein SKU5 [Populus euphratica]
20 Hb_010812_060 0.1754230184 - - PREDICTED: uncharacterized protein LOC105649158 [Jatropha curcas]

Gene co-expression network

sample Hb_001862_030 Hb_001862_030 Hb_003667_020 Hb_003667_020 Hb_001862_030--Hb_003667_020 Hb_002463_050 Hb_002463_050 Hb_001862_030--Hb_002463_050 Hb_000165_090 Hb_000165_090 Hb_001862_030--Hb_000165_090 Hb_000809_130 Hb_000809_130 Hb_001862_030--Hb_000809_130 Hb_001541_190 Hb_001541_190 Hb_001862_030--Hb_001541_190 Hb_001307_020 Hb_001307_020 Hb_001862_030--Hb_001307_020 Hb_003667_020--Hb_001541_190 Hb_001862_050 Hb_001862_050 Hb_003667_020--Hb_001862_050 Hb_003667_020--Hb_000165_090 Hb_000069_300 Hb_000069_300 Hb_003667_020--Hb_000069_300 Hb_000260_610 Hb_000260_610 Hb_003667_020--Hb_000260_610 Hb_002897_010 Hb_002897_010 Hb_002463_050--Hb_002897_010 Hb_004678_030 Hb_004678_030 Hb_002463_050--Hb_004678_030 Hb_003687_040 Hb_003687_040 Hb_002463_050--Hb_003687_040 Hb_000015_150 Hb_000015_150 Hb_002463_050--Hb_000015_150 Hb_000061_310 Hb_000061_310 Hb_002463_050--Hb_000061_310 Hb_000654_050 Hb_000654_050 Hb_002463_050--Hb_000654_050 Hb_005245_140 Hb_005245_140 Hb_000165_090--Hb_005245_140 Hb_000030_020 Hb_000030_020 Hb_000165_090--Hb_000030_020 Hb_000165_090--Hb_000069_300 Hb_008511_040 Hb_008511_040 Hb_000165_090--Hb_008511_040 Hb_004223_080 Hb_004223_080 Hb_000809_130--Hb_004223_080 Hb_000103_370 Hb_000103_370 Hb_000809_130--Hb_000103_370 Hb_006196_030 Hb_006196_030 Hb_000809_130--Hb_006196_030 Hb_000905_100 Hb_000905_100 Hb_000809_130--Hb_000905_100 Hb_000002_370 Hb_000002_370 Hb_000809_130--Hb_000002_370 Hb_002301_400 Hb_002301_400 Hb_000809_130--Hb_002301_400 Hb_001541_190--Hb_000069_300 Hb_001541_190--Hb_001307_020 Hb_000175_300 Hb_000175_300 Hb_001541_190--Hb_000175_300 Hb_001638_120 Hb_001638_120 Hb_001541_190--Hb_001638_120 Hb_004970_070 Hb_004970_070 Hb_001541_190--Hb_004970_070 Hb_001307_020--Hb_004223_080 Hb_000027_160 Hb_000027_160 Hb_001307_020--Hb_000027_160 Hb_001828_110 Hb_001828_110 Hb_001307_020--Hb_001828_110 Hb_001307_020--Hb_000905_100 Hb_001307_020--Hb_000809_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.48023 159.041 365.649 242.709 26.2062 27.1715
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.54472 2.95081 2.44484 31.5137 75.8449

CAGE analysis