Hb_001863_180

Information

Type -
Description -
Location Contig1863: 126695-129447
Sequence    

Annotation

kegg
ID rcu:RCOM_1037080
description Serine/threonine-protein kinase SAPK1, putative (EC:2.7.11.1)
nr
ID XP_012067903.1
description PREDICTED: serine/threonine-protein kinase SAPK2 isoform X1 [Jatropha curcas]
swissprot
ID A2YNT8
description Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2
trembl
ID A0A067KYY2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15818 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18343: 126873-129321
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_180 0.0 - - PREDICTED: serine/threonine-protein kinase SAPK2 isoform X1 [Jatropha curcas]
2 Hb_003053_070 0.1128487784 - - PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic [Jatropha curcas]
3 Hb_003680_090 0.1162025735 - - PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Jatropha curcas]
4 Hb_000310_060 0.1273925215 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
5 Hb_000270_280 0.127840103 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
6 Hb_005527_060 0.1331352063 - - malic enzyme, putative [Ricinus communis]
7 Hb_001360_030 0.1342476424 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
8 Hb_001227_140 0.1388969892 - - PREDICTED: protein ROS1 [Jatropha curcas]
9 Hb_002811_310 0.1390869404 - - hypothetical protein VITISV_025505 [Vitis vinifera]
10 Hb_001365_030 0.1403562453 - - PREDICTED: uncharacterized protein LOC102609547 [Citrus sinensis]
11 Hb_010632_020 0.1410671666 - - hypothetical protein POPTR_0006s185902g, partial [Populus trichocarpa]
12 Hb_003915_020 0.1415209177 - - PREDICTED: outer envelope pore protein 37, chloroplastic [Jatropha curcas]
13 Hb_000940_030 0.1431763719 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
14 Hb_002486_060 0.1443579078 - - hypothetical protein JCGZ_01211 [Jatropha curcas]
15 Hb_112064_010 0.1452519441 - - PREDICTED: inositol-phosphate phosphatase [Jatropha curcas]
16 Hb_004837_100 0.1511584837 - - PREDICTED: dicarboxylate transporter 1, chloroplastic [Jatropha curcas]
17 Hb_004648_030 0.1562033807 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
18 Hb_004162_270 0.1562884272 - - PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic isoform X1 [Jatropha curcas]
19 Hb_004102_080 0.1580067741 - - PREDICTED: acyl-protein thioesterase 2 [Jatropha curcas]
20 Hb_001587_040 0.1601236006 - - PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_001863_180 Hb_001863_180 Hb_003053_070 Hb_003053_070 Hb_001863_180--Hb_003053_070 Hb_003680_090 Hb_003680_090 Hb_001863_180--Hb_003680_090 Hb_000310_060 Hb_000310_060 Hb_001863_180--Hb_000310_060 Hb_000270_280 Hb_000270_280 Hb_001863_180--Hb_000270_280 Hb_005527_060 Hb_005527_060 Hb_001863_180--Hb_005527_060 Hb_001360_030 Hb_001360_030 Hb_001863_180--Hb_001360_030 Hb_004837_100 Hb_004837_100 Hb_003053_070--Hb_004837_100 Hb_001365_020 Hb_001365_020 Hb_003053_070--Hb_001365_020 Hb_000684_200 Hb_000684_200 Hb_003053_070--Hb_000684_200 Hb_004162_270 Hb_004162_270 Hb_003053_070--Hb_004162_270 Hb_000516_080 Hb_000516_080 Hb_003053_070--Hb_000516_080 Hb_001365_030 Hb_001365_030 Hb_003053_070--Hb_001365_030 Hb_005917_020 Hb_005917_020 Hb_003680_090--Hb_005917_020 Hb_003680_090--Hb_000270_280 Hb_002811_310 Hb_002811_310 Hb_003680_090--Hb_002811_310 Hb_003680_090--Hb_004162_270 Hb_003680_090--Hb_003053_070 Hb_000310_060--Hb_000270_280 Hb_003398_040 Hb_003398_040 Hb_000310_060--Hb_003398_040 Hb_001587_040 Hb_001587_040 Hb_000310_060--Hb_001587_040 Hb_000940_030 Hb_000940_030 Hb_000310_060--Hb_000940_030 Hb_000327_200 Hb_000327_200 Hb_000310_060--Hb_000327_200 Hb_000310_060--Hb_005527_060 Hb_000270_280--Hb_000940_030 Hb_004648_030 Hb_004648_030 Hb_000270_280--Hb_004648_030 Hb_000270_280--Hb_004162_270 Hb_005784_030 Hb_005784_030 Hb_000270_280--Hb_005784_030 Hb_002432_050 Hb_002432_050 Hb_005527_060--Hb_002432_050 Hb_005527_060--Hb_003398_040 Hb_005527_060--Hb_001587_040 Hb_000589_170 Hb_000589_170 Hb_005527_060--Hb_000589_170 Hb_000011_560 Hb_000011_560 Hb_005527_060--Hb_000011_560 Hb_010632_020 Hb_010632_020 Hb_001360_030--Hb_010632_020 Hb_001360_030--Hb_001365_020 Hb_002636_060 Hb_002636_060 Hb_001360_030--Hb_002636_060 Hb_112064_010 Hb_112064_010 Hb_001360_030--Hb_112064_010 Hb_005276_070 Hb_005276_070 Hb_001360_030--Hb_005276_070 Hb_001360_030--Hb_001365_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.6491 7.3137 39.8419 10.9333 0.535158 1.73304
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.11947 1.82444 5.28447 13.8435 32.1697

CAGE analysis