Hb_001863_280

Information

Type -
Description -
Location Contig1863: 251211-252152
Sequence    

Annotation

kegg
ID rcu:RCOM_1036530
description hypothetical protein
nr
ID XP_012067892.1
description PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
swissprot
ID Q9FE06
description Protein EXORDIUM-like 2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1
trembl
ID A0A067LA68
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15807 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_280 0.0 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
2 Hb_116783_010 0.1403391262 - - hypothetical protein POPTR_0011s16190g [Populus trichocarpa]
3 Hb_005503_010 0.1514227843 - - PREDICTED: probable protein Pop3 [Jatropha curcas]
4 Hb_002809_020 0.1546620181 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
5 Hb_000925_120 0.1568672598 - - Spotted leaf protein, putative [Ricinus communis]
6 Hb_012368_080 0.1639065585 - - PREDICTED: uncharacterized protein LOC105126277 [Populus euphratica]
7 Hb_098030_010 0.1680974711 - - hypothetical protein JCGZ_06251 [Jatropha curcas]
8 Hb_000147_010 0.1763359123 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
9 Hb_007017_120 0.1795023253 - - PREDICTED: exocyst complex component EXO84A [Jatropha curcas]
10 Hb_003789_020 0.1802533401 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
11 Hb_003768_100 0.182806638 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
12 Hb_055154_010 0.1830430582 - - PREDICTED: laccase-7 [Jatropha curcas]
13 Hb_003226_050 0.1866854852 - - Pectinesterase-3 precursor, putative [Ricinus communis]
14 Hb_000297_180 0.1881817894 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
15 Hb_000364_130 0.1911080935 - - unnamed protein product [Vitis vinifera]
16 Hb_003893_100 0.1936624382 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
17 Hb_090510_010 0.1938124588 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
18 Hb_001242_020 0.1950353627 - - hypothetical protein JCGZ_08334 [Jatropha curcas]
19 Hb_001360_060 0.1953539854 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32 [Jatropha curcas]
20 Hb_008418_010 0.1976265244 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH93-like [Jatropha curcas]

Gene co-expression network

sample Hb_001863_280 Hb_001863_280 Hb_116783_010 Hb_116783_010 Hb_001863_280--Hb_116783_010 Hb_005503_010 Hb_005503_010 Hb_001863_280--Hb_005503_010 Hb_002809_020 Hb_002809_020 Hb_001863_280--Hb_002809_020 Hb_000925_120 Hb_000925_120 Hb_001863_280--Hb_000925_120 Hb_012368_080 Hb_012368_080 Hb_001863_280--Hb_012368_080 Hb_098030_010 Hb_098030_010 Hb_001863_280--Hb_098030_010 Hb_116783_010--Hb_000925_120 Hb_000147_010 Hb_000147_010 Hb_116783_010--Hb_000147_010 Hb_055154_010 Hb_055154_010 Hb_116783_010--Hb_055154_010 Hb_090510_010 Hb_090510_010 Hb_116783_010--Hb_090510_010 Hb_116783_010--Hb_002809_020 Hb_001242_020 Hb_001242_020 Hb_116783_010--Hb_001242_020 Hb_000364_130 Hb_000364_130 Hb_005503_010--Hb_000364_130 Hb_007017_120 Hb_007017_120 Hb_005503_010--Hb_007017_120 Hb_003768_100 Hb_003768_100 Hb_005503_010--Hb_003768_100 Hb_001360_060 Hb_001360_060 Hb_005503_010--Hb_001360_060 Hb_003226_050 Hb_003226_050 Hb_005503_010--Hb_003226_050 Hb_002809_020--Hb_007017_120 Hb_178252_010 Hb_178252_010 Hb_002809_020--Hb_178252_010 Hb_002809_020--Hb_098030_010 Hb_002809_020--Hb_055154_010 Hb_003166_020 Hb_003166_020 Hb_002809_020--Hb_003166_020 Hb_008418_010 Hb_008418_010 Hb_002809_020--Hb_008418_010 Hb_000925_120--Hb_000147_010 Hb_000925_120--Hb_055154_010 Hb_003020_340 Hb_003020_340 Hb_000925_120--Hb_003020_340 Hb_000002_150 Hb_000002_150 Hb_000925_120--Hb_000002_150 Hb_000925_120--Hb_002809_020 Hb_003893_100 Hb_003893_100 Hb_012368_080--Hb_003893_100 Hb_000297_180 Hb_000297_180 Hb_012368_080--Hb_000297_180 Hb_006637_040 Hb_006637_040 Hb_012368_080--Hb_006637_040 Hb_018591_010 Hb_018591_010 Hb_012368_080--Hb_018591_010 Hb_012368_080--Hb_098030_010 Hb_002301_420 Hb_002301_420 Hb_012368_080--Hb_002301_420 Hb_098030_010--Hb_008418_010 Hb_098030_010--Hb_006637_040 Hb_098030_010--Hb_018591_010 Hb_098030_010--Hb_003768_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.44753 4.13812 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.300701 0 8.44306 0.262462

CAGE analysis