Hb_001865_110

Information

Type -
Description -
Location Contig1865: 141324-144699
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001865_110 0.0 - - -
2 Hb_005222_020 0.1461758722 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
3 Hb_106029_010 0.1734096929 - - Transcription factor ICE1, putative [Ricinus communis]
4 Hb_000501_020 0.1909025036 - - PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
5 Hb_141408_010 0.2231568275 - - PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
6 Hb_148262_020 0.2258167354 - - -
7 Hb_000270_150 0.2260400848 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
8 Hb_002272_190 0.2343771906 - - Kinesin heavy chain, putative [Ricinus communis]
9 Hb_001257_020 0.2354067112 - - -
10 Hb_006922_040 0.2435587892 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
11 Hb_052600_010 0.2512986691 - - -
12 Hb_001241_090 0.2512986712 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
13 Hb_140618_010 0.251298681 - - -
14 Hb_005396_140 0.2513112247 - - -
15 Hb_001105_080 0.2514293291 - - -
16 Hb_000445_220 0.2522511776 - - -
17 Hb_000736_010 0.2558411101 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
18 Hb_007416_040 0.2563417559 - - glutamate receptor 2 plant, putative [Ricinus communis]
19 Hb_000275_010 0.257058307 - - -
20 Hb_005834_030 0.2571810401 - - -

Gene co-expression network

sample Hb_001865_110 Hb_001865_110 Hb_005222_020 Hb_005222_020 Hb_001865_110--Hb_005222_020 Hb_106029_010 Hb_106029_010 Hb_001865_110--Hb_106029_010 Hb_000501_020 Hb_000501_020 Hb_001865_110--Hb_000501_020 Hb_141408_010 Hb_141408_010 Hb_001865_110--Hb_141408_010 Hb_148262_020 Hb_148262_020 Hb_001865_110--Hb_148262_020 Hb_000270_150 Hb_000270_150 Hb_001865_110--Hb_000270_150 Hb_000275_010 Hb_000275_010 Hb_005222_020--Hb_000275_010 Hb_001379_130 Hb_001379_130 Hb_005222_020--Hb_001379_130 Hb_000003_770 Hb_000003_770 Hb_005222_020--Hb_000003_770 Hb_005222_020--Hb_000501_020 Hb_000736_010 Hb_000736_010 Hb_005222_020--Hb_000736_010 Hb_106029_010--Hb_148262_020 Hb_106029_010--Hb_000501_020 Hb_001257_020 Hb_001257_020 Hb_106029_010--Hb_001257_020 Hb_106029_010--Hb_000736_010 Hb_106029_010--Hb_005222_020 Hb_006922_040 Hb_006922_040 Hb_000501_020--Hb_006922_040 Hb_000445_220 Hb_000445_220 Hb_000501_020--Hb_000445_220 Hb_081207_010 Hb_081207_010 Hb_000501_020--Hb_081207_010 Hb_000956_140 Hb_000956_140 Hb_141408_010--Hb_000956_140 Hb_137268_010 Hb_137268_010 Hb_141408_010--Hb_137268_010 Hb_000083_190 Hb_000083_190 Hb_141408_010--Hb_000083_190 Hb_052600_010 Hb_052600_010 Hb_141408_010--Hb_052600_010 Hb_001241_090 Hb_001241_090 Hb_141408_010--Hb_001241_090 Hb_140618_010 Hb_140618_010 Hb_141408_010--Hb_140618_010 Hb_148262_020--Hb_001257_020 Hb_148262_020--Hb_000270_150 Hb_148262_020--Hb_001379_130 Hb_148262_020--Hb_000736_010 Hb_148262_020--Hb_000003_770 Hb_000067_020 Hb_000067_020 Hb_000270_150--Hb_000067_020 Hb_007913_040 Hb_007913_040 Hb_000270_150--Hb_007913_040 Hb_002245_040 Hb_002245_040 Hb_000270_150--Hb_002245_040 Hb_000270_150--Hb_001257_020 Hb_000270_150--Hb_000736_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0492078 0 0.0369225 0 0 0.043403
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.677283 0.266317 0 0 0

CAGE analysis