Hb_001892_120

Information

Type -
Description -
Location Contig1892: 106778-116695
Sequence    

Annotation

kegg
ID rcu:RCOM_0843820
description Major latex protein, putative
nr
ID XP_012072242.1
description PREDICTED: MLP-like protein 328 [Jatropha curcas]
swissprot
ID Q9ZVF3
description MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=2 SV=1
trembl
ID A0A067L1V0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04717 PE=4 SV=1
Gene Ontology
ID GO:0006952
description mlp-like protein 328

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001892_120 0.0 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]
2 Hb_002820_140 0.170547731 - - PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]
3 Hb_002099_050 0.1735999922 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001279_130 0.2202085109 - - hypothetical protein L484_017676 [Morus notabilis]
5 Hb_000699_120 0.2205478931 - - DNA-binding family protein [Populus trichocarpa]
6 Hb_000638_020 0.2271035608 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 9-like [Jatropha curcas]
7 Hb_002260_090 0.2280983902 - - PREDICTED: uncharacterized protein LOC105636025 isoform X1 [Jatropha curcas]
8 Hb_011671_400 0.2375302356 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
9 Hb_003052_040 0.2394863595 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000077_410 0.2465515642 - - protein with unknown function [Ricinus communis]
11 Hb_002983_030 0.2479809682 desease resistance Gene Name: NB-ARC hypothetical protein CISIN_1g046124mg, partial [Citrus sinensis]
12 Hb_005841_040 0.2532129249 - - stress-induced hydrophobic peptide 1 [Hevea brasiliensis]
13 Hb_113951_010 0.2542593781 - - hypothetical protein JCGZ_06358 [Jatropha curcas]
14 Hb_000380_020 0.2545292514 transcription factor TF Family: C3H PREDICTED: zinc finger protein 36, C3H1 type-like 3 [Jatropha curcas]
15 Hb_027346_020 0.2546918978 - - -
16 Hb_005914_070 0.255828919 - - conserved hypothetical protein [Ricinus communis]
17 Hb_014497_110 0.256053514 - - PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]
18 Hb_010589_110 0.2562051457 - - PREDICTED: pumilio homolog 12-like [Jatropha curcas]
19 Hb_002182_090 0.258224035 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 [Gossypium raimondii]
20 Hb_000193_240 0.2591267167 - - hypothetical protein CISIN_1g0449881mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_001892_120 Hb_001892_120 Hb_002820_140 Hb_002820_140 Hb_001892_120--Hb_002820_140 Hb_002099_050 Hb_002099_050 Hb_001892_120--Hb_002099_050 Hb_001279_130 Hb_001279_130 Hb_001892_120--Hb_001279_130 Hb_000699_120 Hb_000699_120 Hb_001892_120--Hb_000699_120 Hb_000638_020 Hb_000638_020 Hb_001892_120--Hb_000638_020 Hb_002260_090 Hb_002260_090 Hb_001892_120--Hb_002260_090 Hb_005615_070 Hb_005615_070 Hb_002820_140--Hb_005615_070 Hb_004297_040 Hb_004297_040 Hb_002820_140--Hb_004297_040 Hb_002820_140--Hb_002260_090 Hb_015974_010 Hb_015974_010 Hb_002820_140--Hb_015974_010 Hb_005908_040 Hb_005908_040 Hb_002820_140--Hb_005908_040 Hb_011671_400 Hb_011671_400 Hb_002099_050--Hb_011671_400 Hb_008864_060 Hb_008864_060 Hb_002099_050--Hb_008864_060 Hb_000250_010 Hb_000250_010 Hb_002099_050--Hb_000250_010 Hb_002099_050--Hb_002260_090 Hb_003052_040 Hb_003052_040 Hb_002099_050--Hb_003052_040 Hb_002182_090 Hb_002182_090 Hb_001279_130--Hb_002182_090 Hb_000380_020 Hb_000380_020 Hb_001279_130--Hb_000380_020 Hb_029243_040 Hb_029243_040 Hb_001279_130--Hb_029243_040 Hb_010594_030 Hb_010594_030 Hb_001279_130--Hb_010594_030 Hb_001102_250 Hb_001102_250 Hb_001279_130--Hb_001102_250 Hb_006594_020 Hb_006594_020 Hb_001279_130--Hb_006594_020 Hb_000178_110 Hb_000178_110 Hb_000699_120--Hb_000178_110 Hb_000077_410 Hb_000077_410 Hb_000699_120--Hb_000077_410 Hb_113951_010 Hb_113951_010 Hb_000699_120--Hb_113951_010 Hb_012725_110 Hb_012725_110 Hb_000699_120--Hb_012725_110 Hb_004705_030 Hb_004705_030 Hb_000699_120--Hb_004705_030 Hb_000836_500 Hb_000836_500 Hb_000699_120--Hb_000836_500 Hb_000193_240 Hb_000193_240 Hb_000638_020--Hb_000193_240 Hb_000638_020--Hb_000380_020 Hb_000638_020--Hb_015974_010 Hb_004453_140 Hb_004453_140 Hb_000638_020--Hb_004453_140 Hb_163950_010 Hb_163950_010 Hb_000638_020--Hb_163950_010 Hb_000832_230 Hb_000832_230 Hb_000638_020--Hb_000832_230 Hb_014497_110 Hb_014497_110 Hb_002260_090--Hb_014497_110 Hb_001213_120 Hb_001213_120 Hb_002260_090--Hb_001213_120 Hb_002260_090--Hb_011671_400 Hb_002260_090--Hb_003052_040 Hb_012366_020 Hb_012366_020 Hb_002260_090--Hb_012366_020 Hb_002260_090--Hb_005908_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.128714 0 0 0 0.0345115 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0841619 0.198605 0.184435 0.026535 0

CAGE analysis