Hb_001900_130

Information

Type -
Description -
Location Contig1900: 234839-240859
Sequence    

Annotation

kegg
ID tcc:TCM_016677
description hypothetical protein
nr
ID XP_012070501.1
description PREDICTED: uncharacterized protein LOC105632667 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXS8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02768 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001900_130 0.0 - - PREDICTED: uncharacterized protein LOC105632667 [Jatropha curcas]
2 Hb_000380_130 0.1421126958 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
3 Hb_011671_420 0.1456446658 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
4 Hb_008768_010 0.1492162603 - - PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
5 Hb_000422_020 0.1495360136 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
6 Hb_033622_020 0.1506742834 - - lipid binding protein, putative [Ricinus communis]
7 Hb_025526_010 0.1598412873 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
8 Hb_074892_010 0.165152574 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
9 Hb_001218_070 0.166285329 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
10 Hb_006651_010 0.1682641868 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
11 Hb_056101_010 0.1691891463 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]
12 Hb_000683_010 0.1730920762 - - Interleukin-1 receptor-associated kinase, putative [Ricinus communis]
13 Hb_006970_100 0.1750481028 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_000575_110 0.1762606393 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
15 Hb_000230_230 0.1809434225 - - hydrolase, putative [Ricinus communis]
16 Hb_001597_110 0.1819304043 - - -
17 Hb_046770_010 0.1869298147 - - conserved hypothetical protein [Ricinus communis]
18 Hb_010761_030 0.1882257203 - - cytochrome P450, putative [Ricinus communis]
19 Hb_006788_150 0.1908719887 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004223_180 0.1914982322 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]

Gene co-expression network

sample Hb_001900_130 Hb_001900_130 Hb_000380_130 Hb_000380_130 Hb_001900_130--Hb_000380_130 Hb_011671_420 Hb_011671_420 Hb_001900_130--Hb_011671_420 Hb_008768_010 Hb_008768_010 Hb_001900_130--Hb_008768_010 Hb_000422_020 Hb_000422_020 Hb_001900_130--Hb_000422_020 Hb_033622_020 Hb_033622_020 Hb_001900_130--Hb_033622_020 Hb_025526_010 Hb_025526_010 Hb_001900_130--Hb_025526_010 Hb_074892_010 Hb_074892_010 Hb_000380_130--Hb_074892_010 Hb_000380_130--Hb_033622_020 Hb_001218_070 Hb_001218_070 Hb_000380_130--Hb_001218_070 Hb_046770_010 Hb_046770_010 Hb_000380_130--Hb_046770_010 Hb_001597_110 Hb_001597_110 Hb_000380_130--Hb_001597_110 Hb_000380_130--Hb_011671_420 Hb_011671_420--Hb_001218_070 Hb_011671_420--Hb_046770_010 Hb_011671_420--Hb_008768_010 Hb_109673_010 Hb_109673_010 Hb_011671_420--Hb_109673_010 Hb_029769_010 Hb_029769_010 Hb_011671_420--Hb_029769_010 Hb_008768_010--Hb_000422_020 Hb_000683_010 Hb_000683_010 Hb_008768_010--Hb_000683_010 Hb_004881_060 Hb_004881_060 Hb_008768_010--Hb_004881_060 Hb_008768_010--Hb_025526_010 Hb_000205_210 Hb_000205_210 Hb_008768_010--Hb_000205_210 Hb_000575_110 Hb_000575_110 Hb_000422_020--Hb_000575_110 Hb_000422_020--Hb_000683_010 Hb_003900_050 Hb_003900_050 Hb_000422_020--Hb_003900_050 Hb_056101_010 Hb_056101_010 Hb_000422_020--Hb_056101_010 Hb_000422_020--Hb_025526_010 Hb_033622_020--Hb_001597_110 Hb_135554_010 Hb_135554_010 Hb_033622_020--Hb_135554_010 Hb_033622_020--Hb_074892_010 Hb_006970_100 Hb_006970_100 Hb_033622_020--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_033622_020--Hb_006651_010 Hb_006788_150 Hb_006788_150 Hb_025526_010--Hb_006788_150 Hb_025526_010--Hb_056101_010 Hb_000661_230 Hb_000661_230 Hb_025526_010--Hb_000661_230 Hb_025526_010--Hb_004881_060 Hb_003060_080 Hb_003060_080 Hb_025526_010--Hb_003060_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0717866 0.0378263 0.0584855 0.0184906 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0176595 0 0.695515 0.186632

CAGE analysis