Hb_001902_020

Information

Type -
Description -
Location Contig1902: 11923-15139
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001902_020 0.0 - - -
2 Hb_001903_080 0.2398908323 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
3 Hb_011639_070 0.2660724005 - - PREDICTED: uncharacterized protein LOC105636024 isoform X2 [Jatropha curcas]
4 Hb_143397_010 0.27682109 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
5 Hb_002498_200 0.2837428435 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
6 Hb_008707_030 0.2950530321 - - PREDICTED: uncharacterized protein LOC104447982 [Eucalyptus grandis]
7 Hb_001055_040 0.3007161553 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
8 Hb_095413_040 0.3039604019 - - -
9 Hb_049438_010 0.3114193683 - - -
10 Hb_017836_010 0.3121810999 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
11 Hb_000926_220 0.3147840314 - - -
12 Hb_000101_180 0.3178339448 - - -
13 Hb_001993_020 0.3210820879 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
14 Hb_032264_130 0.3293917723 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
15 Hb_123104_010 0.3320514165 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
16 Hb_000392_390 0.3347026392 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
17 Hb_000200_190 0.3413515538 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 15 [Jatropha curcas]
18 Hb_005797_050 0.3450890337 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
19 Hb_158990_010 0.347685845 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
20 Hb_002477_230 0.3481337532 - - PREDICTED: verprolin [Jatropha curcas]

Gene co-expression network

sample Hb_001902_020 Hb_001902_020 Hb_001903_080 Hb_001903_080 Hb_001902_020--Hb_001903_080 Hb_011639_070 Hb_011639_070 Hb_001902_020--Hb_011639_070 Hb_143397_010 Hb_143397_010 Hb_001902_020--Hb_143397_010 Hb_002498_200 Hb_002498_200 Hb_001902_020--Hb_002498_200 Hb_008707_030 Hb_008707_030 Hb_001902_020--Hb_008707_030 Hb_001055_040 Hb_001055_040 Hb_001902_020--Hb_001055_040 Hb_001903_080--Hb_011639_070 Hb_000392_390 Hb_000392_390 Hb_001903_080--Hb_000392_390 Hb_011909_090 Hb_011909_090 Hb_001903_080--Hb_011909_090 Hb_001903_080--Hb_002498_200 Hb_095413_040 Hb_095413_040 Hb_001903_080--Hb_095413_040 Hb_000094_390 Hb_000094_390 Hb_011639_070--Hb_000094_390 Hb_001691_050 Hb_001691_050 Hb_011639_070--Hb_001691_050 Hb_040506_010 Hb_040506_010 Hb_011639_070--Hb_040506_010 Hb_000028_630 Hb_000028_630 Hb_011639_070--Hb_000028_630 Hb_000733_040 Hb_000733_040 Hb_011639_070--Hb_000733_040 Hb_001304_100 Hb_001304_100 Hb_143397_010--Hb_001304_100 Hb_143397_010--Hb_008707_030 Hb_104812_030 Hb_104812_030 Hb_143397_010--Hb_104812_030 Hb_007810_050 Hb_007810_050 Hb_143397_010--Hb_007810_050 Hb_032264_130 Hb_032264_130 Hb_143397_010--Hb_032264_130 Hb_049438_010 Hb_049438_010 Hb_002498_200--Hb_049438_010 Hb_002498_200--Hb_095413_040 Hb_122567_010 Hb_122567_010 Hb_002498_200--Hb_122567_010 Hb_017836_010 Hb_017836_010 Hb_002498_200--Hb_017836_010 Hb_000926_220 Hb_000926_220 Hb_002498_200--Hb_000926_220 Hb_002498_200--Hb_011909_090 Hb_095471_010 Hb_095471_010 Hb_008707_030--Hb_095471_010 Hb_129067_010 Hb_129067_010 Hb_008707_030--Hb_129067_010 Hb_151628_010 Hb_151628_010 Hb_008707_030--Hb_151628_010 Hb_088542_010 Hb_088542_010 Hb_008707_030--Hb_088542_010 Hb_123104_010 Hb_123104_010 Hb_008707_030--Hb_123104_010 Hb_003687_180 Hb_003687_180 Hb_001055_040--Hb_003687_180 Hb_032533_010 Hb_032533_010 Hb_001055_040--Hb_032533_010 Hb_001055_040--Hb_000926_220 Hb_001055_040--Hb_017836_010 Hb_000721_020 Hb_000721_020 Hb_001055_040--Hb_000721_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.2188 0 0 0 0.188027 0.0447188
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0916014 0.157795 0 0

CAGE analysis