Hb_001907_020

Information

Type -
Description -
Location Contig1907: 44786-47671
Sequence    

Annotation

kegg
ID vvi:100264911
description receptor-like protein 12
nr
ID XP_010657517.1
description PREDICTED: receptor-like protein 12 [Vitis vinifera]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID V4UA41
description Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100140161mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001907_020 0.0 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
2 Hb_011344_140 0.0814538524 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
3 Hb_022108_010 0.1035646455 - - G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Glycine soja]
4 Hb_000649_280 0.1121395373 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
5 Hb_004055_100 0.1227719733 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
6 Hb_026053_030 0.1280918043 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
7 Hb_002045_220 0.1302039437 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
8 Hb_000465_380 0.1341982715 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_005542_110 0.1357728752 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
10 Hb_008195_020 0.1393985539 - - Vacuolar-processing enzyme precursor [Ricinus communis]
11 Hb_000377_160 0.1415685776 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
12 Hb_000563_120 0.1452904816 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
13 Hb_000684_010 0.1459711233 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
14 Hb_000668_160 0.1517664403 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
15 Hb_000044_050 0.1522139154 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
16 Hb_010921_060 0.1526911718 - - ATP binding protein, putative [Ricinus communis]
17 Hb_129399_010 0.1548188329 - - cytochrome P450, putative [Ricinus communis]
18 Hb_002239_020 0.159141649 - - MLO, putative [Theobroma cacao]
19 Hb_000120_980 0.1604566542 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
20 Hb_007320_020 0.1682767002 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_001907_020 Hb_001907_020 Hb_011344_140 Hb_011344_140 Hb_001907_020--Hb_011344_140 Hb_022108_010 Hb_022108_010 Hb_001907_020--Hb_022108_010 Hb_000649_280 Hb_000649_280 Hb_001907_020--Hb_000649_280 Hb_004055_100 Hb_004055_100 Hb_001907_020--Hb_004055_100 Hb_026053_030 Hb_026053_030 Hb_001907_020--Hb_026053_030 Hb_002045_220 Hb_002045_220 Hb_001907_020--Hb_002045_220 Hb_011344_140--Hb_002045_220 Hb_010921_060 Hb_010921_060 Hb_011344_140--Hb_010921_060 Hb_000465_380 Hb_000465_380 Hb_011344_140--Hb_000465_380 Hb_000412_090 Hb_000412_090 Hb_011344_140--Hb_000412_090 Hb_011344_140--Hb_000649_280 Hb_022108_010--Hb_004055_100 Hb_005542_110 Hb_005542_110 Hb_022108_010--Hb_005542_110 Hb_000684_010 Hb_000684_010 Hb_022108_010--Hb_000684_010 Hb_000120_980 Hb_000120_980 Hb_022108_010--Hb_000120_980 Hb_003469_010 Hb_003469_010 Hb_022108_010--Hb_003469_010 Hb_000377_160 Hb_000377_160 Hb_000649_280--Hb_000377_160 Hb_003767_010 Hb_003767_010 Hb_000649_280--Hb_003767_010 Hb_000563_120 Hb_000563_120 Hb_000649_280--Hb_000563_120 Hb_007420_010 Hb_007420_010 Hb_000649_280--Hb_007420_010 Hb_123560_050 Hb_123560_050 Hb_000649_280--Hb_123560_050 Hb_004055_100--Hb_005542_110 Hb_005333_100 Hb_005333_100 Hb_004055_100--Hb_005333_100 Hb_004055_100--Hb_000120_980 Hb_004055_100--Hb_000684_010 Hb_000417_150 Hb_000417_150 Hb_026053_030--Hb_000417_150 Hb_000044_050 Hb_000044_050 Hb_026053_030--Hb_000044_050 Hb_004007_230 Hb_004007_230 Hb_026053_030--Hb_004007_230 Hb_031949_010 Hb_031949_010 Hb_026053_030--Hb_031949_010 Hb_026053_030--Hb_011344_140 Hb_002045_220--Hb_000412_090 Hb_002045_220--Hb_010921_060 Hb_002045_220--Hb_004007_230 Hb_002045_220--Hb_000465_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.529798 0.0452359 0.0659139 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.250374 0.228486

CAGE analysis