Hb_001913_010

Information

Type -
Description -
Location Contig1913: 5521-10081
Sequence    

Annotation

kegg
ID rcu:RCOM_0606780
description phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative
nr
ID XP_002530973.1
description phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SYA4
description Phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative OS=Ricinus communis GN=RCOM_0606780 PE=4 SV=1
Gene Ontology
ID GO:0016740
description phosphatidylinositol n-acetylglucosaminyltransferase subunit

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19094: 6252-6420 , PASA_asmbl_19095: 6486-9003 , PASA_asmbl_19096: 9354-9583 , PASA_asmbl_19097: 9776-9961
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001913_010 0.0 - - phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative [Ricinus communis]
2 Hb_001511_020 0.0776731023 - - PREDICTED: peroxisome biogenesis protein 22 [Jatropha curcas]
3 Hb_002399_010 0.077976427 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001274_030 0.0816556797 - - PREDICTED: uncharacterized protein LOC105628035 [Jatropha curcas]
5 Hb_004109_200 0.0817933853 - - PREDICTED: protein OSB2, chloroplastic-like [Jatropha curcas]
6 Hb_010381_070 0.0860281915 - - PREDICTED: protein STU1-like [Jatropha curcas]
7 Hb_000162_090 0.0863858737 - - PREDICTED: methyltransferase-like protein 16 isoform X1 [Jatropha curcas]
8 Hb_002375_020 0.086740556 - - PREDICTED: ankyrin repeat domain-containing protein 65-like [Jatropha curcas]
9 Hb_000175_450 0.0886386718 - - PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Jatropha curcas]
10 Hb_003025_090 0.0887420372 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
11 Hb_012340_030 0.0915120414 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
12 Hb_001301_160 0.0928260202 - - PREDICTED: CRS2-associated factor 2, mitochondrial [Jatropha curcas]
13 Hb_001823_100 0.0928888617 - - PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis vinifera]
14 Hb_000188_100 0.0937426428 - - PREDICTED: protein YIPF5 homolog [Jatropha curcas]
15 Hb_000473_040 0.0938829861 transcription factor TF Family: Coactivator p15 PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like [Jatropha curcas]
16 Hb_000554_020 0.095557054 - - PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like [Jatropha curcas]
17 Hb_000123_120 0.0957342257 - - actin depolymerizing factor 4 [Hevea brasiliensis]
18 Hb_002007_060 0.095853691 - - hypothetical protein JCGZ_23323 [Jatropha curcas]
19 Hb_000754_060 0.1007317112 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 69 isoform X1 [Jatropha curcas]
20 Hb_135545_010 0.1024833135 - - calmodulin binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001913_010 Hb_001913_010 Hb_001511_020 Hb_001511_020 Hb_001913_010--Hb_001511_020 Hb_002399_010 Hb_002399_010 Hb_001913_010--Hb_002399_010 Hb_001274_030 Hb_001274_030 Hb_001913_010--Hb_001274_030 Hb_004109_200 Hb_004109_200 Hb_001913_010--Hb_004109_200 Hb_010381_070 Hb_010381_070 Hb_001913_010--Hb_010381_070 Hb_000162_090 Hb_000162_090 Hb_001913_010--Hb_000162_090 Hb_001439_150 Hb_001439_150 Hb_001511_020--Hb_001439_150 Hb_001301_160 Hb_001301_160 Hb_001511_020--Hb_001301_160 Hb_001511_020--Hb_000162_090 Hb_001623_420 Hb_001623_420 Hb_001511_020--Hb_001623_420 Hb_003642_060 Hb_003642_060 Hb_001511_020--Hb_003642_060 Hb_002685_140 Hb_002685_140 Hb_001511_020--Hb_002685_140 Hb_001073_070 Hb_001073_070 Hb_002399_010--Hb_001073_070 Hb_000554_020 Hb_000554_020 Hb_002399_010--Hb_000554_020 Hb_002375_020 Hb_002375_020 Hb_002399_010--Hb_002375_020 Hb_003025_090 Hb_003025_090 Hb_002399_010--Hb_003025_090 Hb_004324_370 Hb_004324_370 Hb_002399_010--Hb_004324_370 Hb_001823_100 Hb_001823_100 Hb_001274_030--Hb_001823_100 Hb_001274_030--Hb_000162_090 Hb_000803_150 Hb_000803_150 Hb_001274_030--Hb_000803_150 Hb_007951_050 Hb_007951_050 Hb_001274_030--Hb_007951_050 Hb_000787_110 Hb_000787_110 Hb_001274_030--Hb_000787_110 Hb_004109_200--Hb_010381_070 Hb_000139_410 Hb_000139_410 Hb_004109_200--Hb_000139_410 Hb_021254_030 Hb_021254_030 Hb_004109_200--Hb_021254_030 Hb_000483_350 Hb_000483_350 Hb_004109_200--Hb_000483_350 Hb_004109_200--Hb_002375_020 Hb_005306_110 Hb_005306_110 Hb_004109_200--Hb_005306_110 Hb_010381_070--Hb_000139_410 Hb_010381_070--Hb_002375_020 Hb_010381_070--Hb_001623_420 Hb_000754_060 Hb_000754_060 Hb_010381_070--Hb_000754_060 Hb_001584_330 Hb_001584_330 Hb_010381_070--Hb_001584_330 Hb_000162_090--Hb_003642_060 Hb_000162_090--Hb_000803_150 Hb_000165_030 Hb_000165_030 Hb_000162_090--Hb_000165_030 Hb_000089_220 Hb_000089_220 Hb_000162_090--Hb_000089_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.6353 5.07444 2.77232 2.29848 6.42041 10.0713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.29236 10.1026 9.19339 1.52579 1.64461

CAGE analysis