Hb_001922_180

Information

Type -
Description -
Location Contig1922: 161346-162278
Sequence    

Annotation

kegg
ID rcu:RCOM_1581410
description hevamine-A precursor, putative (EC:3.2.1.17)
nr
ID XP_002513612.1
description hevamine-A precursor, putative [Ricinus communis]
swissprot
ID P19172
description Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2
trembl
ID B9RIP3
description Hevamine-A, putative OS=Ricinus communis GN=RCOM_1581410 PE=3 SV=1
Gene Ontology
ID GO:0005773
description hevamine-a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001922_180 0.0 - - hevamine-A precursor, putative [Ricinus communis]
2 Hb_033376_010 0.170209163 - - hypothetical protein POPTR_0008s02960g [Populus trichocarpa]
3 Hb_001205_160 0.2120507553 - - hypothetical protein POPTR_0005s12560g [Populus trichocarpa]
4 Hb_000975_180 0.2162044597 - - Uncharacterized protein TCM_041879 [Theobroma cacao]
5 Hb_000130_100 0.2183607943 - - hypothetical protein CICLE_v10022662mg [Citrus clementina]
6 Hb_000032_050 0.2272704016 - - hypothetical protein RCOM_1691130 [Ricinus communis]
7 Hb_003502_100 0.2285146235 - - -
8 Hb_005245_070 0.2387392023 - - PREDICTED: uncharacterized protein LOC105643658 [Jatropha curcas]
9 Hb_021924_010 0.2425238961 - - hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
10 Hb_006452_110 0.2429793946 - - Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative [Ricinus communis]
11 Hb_000408_050 0.2436239315 - - hypothetical protein POPTR_0018s11350g [Populus trichocarpa]
12 Hb_000896_110 0.24505241 - - -
13 Hb_001163_040 0.2494271539 - - Cytochrome-c oxidases,electron carriers [Theobroma cacao]
14 Hb_001635_020 0.2496066875 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
15 Hb_000181_380 0.2508475882 - - PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas]
16 Hb_000138_170 0.251726756 - - putative plastid-lipid-associated protein, partial [Hevea brasiliensis]
17 Hb_000445_170 0.2521993074 - - PREDICTED: probable methyltransferase PMT10 [Jatropha curcas]
18 Hb_001233_020 0.2527964973 - - hypothetical protein JCGZ_04109 [Jatropha curcas]
19 Hb_000080_200 0.2576024498 - - PREDICTED: probable peroxidase 61 [Jatropha curcas]
20 Hb_002740_010 0.2583175156 - - stress-induced hydrophobic peptide [Cleistogenes songorica]

Gene co-expression network

sample Hb_001922_180 Hb_001922_180 Hb_033376_010 Hb_033376_010 Hb_001922_180--Hb_033376_010 Hb_001205_160 Hb_001205_160 Hb_001922_180--Hb_001205_160 Hb_000975_180 Hb_000975_180 Hb_001922_180--Hb_000975_180 Hb_000130_100 Hb_000130_100 Hb_001922_180--Hb_000130_100 Hb_000032_050 Hb_000032_050 Hb_001922_180--Hb_000032_050 Hb_003502_100 Hb_003502_100 Hb_001922_180--Hb_003502_100 Hb_033376_010--Hb_000130_100 Hb_033376_010--Hb_000975_180 Hb_000463_130 Hb_000463_130 Hb_033376_010--Hb_000463_130 Hb_000181_380 Hb_000181_380 Hb_033376_010--Hb_000181_380 Hb_021924_010 Hb_021924_010 Hb_033376_010--Hb_021924_010 Hb_001163_040 Hb_001163_040 Hb_001205_160--Hb_001163_040 Hb_000733_080 Hb_000733_080 Hb_001205_160--Hb_000733_080 Hb_000215_200 Hb_000215_200 Hb_001205_160--Hb_000215_200 Hb_002284_050 Hb_002284_050 Hb_001205_160--Hb_002284_050 Hb_000671_120 Hb_000671_120 Hb_001205_160--Hb_000671_120 Hb_004669_030 Hb_004669_030 Hb_001205_160--Hb_004669_030 Hb_000975_180--Hb_021924_010 Hb_001488_400 Hb_001488_400 Hb_000975_180--Hb_001488_400 Hb_000975_180--Hb_000130_100 Hb_000270_720 Hb_000270_720 Hb_000975_180--Hb_000270_720 Hb_004755_030 Hb_004755_030 Hb_000975_180--Hb_004755_030 Hb_000789_110 Hb_000789_110 Hb_000975_180--Hb_000789_110 Hb_003018_050 Hb_003018_050 Hb_000130_100--Hb_003018_050 Hb_006452_040 Hb_006452_040 Hb_000130_100--Hb_006452_040 Hb_002324_010 Hb_002324_010 Hb_000130_100--Hb_002324_010 Hb_000107_300 Hb_000107_300 Hb_000130_100--Hb_000107_300 Hb_005045_070 Hb_005045_070 Hb_000130_100--Hb_005045_070 Hb_000445_170 Hb_000445_170 Hb_000032_050--Hb_000445_170 Hb_113739_010 Hb_113739_010 Hb_000032_050--Hb_113739_010 Hb_000109_230 Hb_000109_230 Hb_000032_050--Hb_000109_230 Hb_033354_020 Hb_033354_020 Hb_000032_050--Hb_033354_020 Hb_001828_100 Hb_001828_100 Hb_000032_050--Hb_001828_100 Hb_005245_070 Hb_005245_070 Hb_003502_100--Hb_005245_070 Hb_004128_040 Hb_004128_040 Hb_003502_100--Hb_004128_040 Hb_003502_100--Hb_000975_180 Hb_001842_050 Hb_001842_050 Hb_003502_100--Hb_001842_050 Hb_000367_030 Hb_000367_030 Hb_003502_100--Hb_000367_030 Hb_009778_040 Hb_009778_040 Hb_003502_100--Hb_009778_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.422025 0 0.0733843 1.80428 0.0951859 0.258013
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.65869 1.34795 0.318605 0.0700691 0.0884896

CAGE analysis