Hb_001944_020

Information

Type -
Description -
Location Contig1944: 89829-92670
Sequence    

Annotation

kegg
ID rcu:RCOM_0666220
description hypothetical protein
nr
ID XP_012075219.1
description PREDICTED: uncharacterized protein LOC105636535 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09395 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001944_020 0.0 - - PREDICTED: uncharacterized protein LOC105636535 [Jatropha curcas]
2 Hb_002701_220 0.1085292858 - - PREDICTED: solute carrier family 25 member 44 [Jatropha curcas]
3 Hb_002217_090 0.1155310572 - - PREDICTED: probable protein phosphatase 2C 13 [Jatropha curcas]
4 Hb_012107_010 0.1168696832 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
5 Hb_002053_130 0.1203925712 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
6 Hb_003747_210 0.1213912972 - - PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
7 Hb_001500_030 0.1216879924 - - PREDICTED: uncharacterized protein At2g33490 isoform X2 [Jatropha curcas]
8 Hb_000152_330 0.1272179254 - - PREDICTED: AT-hook motif nuclear-localized protein 6-like [Jatropha curcas]
9 Hb_006909_060 0.1339219352 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum]
10 Hb_000656_390 0.1364039979 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]
11 Hb_001411_140 0.1380666787 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
12 Hb_010661_010 0.1382031791 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
13 Hb_004774_020 0.1393165743 - - PREDICTED: PRA1 family protein B4-like [Camelina sativa]
14 Hb_001794_060 0.1412773388 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001699_230 0.1457482374 - - PREDICTED: calcium-dependent protein kinase 28 [Jatropha curcas]
16 Hb_171900_020 0.1487997401 - - PREDICTED: uncharacterized protein LOC105643207 [Jatropha curcas]
17 Hb_005663_070 0.1489117515 - - dehydrin protein [Manihot esculenta]
18 Hb_004724_210 0.1515436492 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003605_240 0.1518600545 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
20 Hb_006788_140 0.1519104253 - - PREDICTED: uncharacterized protein LOC105649915 [Jatropha curcas]

Gene co-expression network

sample Hb_001944_020 Hb_001944_020 Hb_002701_220 Hb_002701_220 Hb_001944_020--Hb_002701_220 Hb_002217_090 Hb_002217_090 Hb_001944_020--Hb_002217_090 Hb_012107_010 Hb_012107_010 Hb_001944_020--Hb_012107_010 Hb_002053_130 Hb_002053_130 Hb_001944_020--Hb_002053_130 Hb_003747_210 Hb_003747_210 Hb_001944_020--Hb_003747_210 Hb_001500_030 Hb_001500_030 Hb_001944_020--Hb_001500_030 Hb_003605_240 Hb_003605_240 Hb_002701_220--Hb_003605_240 Hb_000210_010 Hb_000210_010 Hb_002701_220--Hb_000210_010 Hb_012573_040 Hb_012573_040 Hb_002701_220--Hb_012573_040 Hb_006909_060 Hb_006909_060 Hb_002701_220--Hb_006909_060 Hb_001648_030 Hb_001648_030 Hb_002701_220--Hb_001648_030 Hb_002217_090--Hb_001500_030 Hb_004128_030 Hb_004128_030 Hb_002217_090--Hb_004128_030 Hb_000912_100 Hb_000912_100 Hb_002217_090--Hb_000912_100 Hb_002217_090--Hb_003747_210 Hb_000711_010 Hb_000711_010 Hb_002217_090--Hb_000711_010 Hb_002876_210 Hb_002876_210 Hb_002217_090--Hb_002876_210 Hb_012107_010--Hb_002053_130 Hb_000417_420 Hb_000417_420 Hb_012107_010--Hb_000417_420 Hb_002639_100 Hb_002639_100 Hb_012107_010--Hb_002639_100 Hb_012107_010--Hb_001500_030 Hb_012107_010--Hb_003747_210 Hb_002053_130--Hb_002639_100 Hb_005496_180 Hb_005496_180 Hb_002053_130--Hb_005496_180 Hb_000179_240 Hb_000179_240 Hb_002053_130--Hb_000179_240 Hb_171900_020 Hb_171900_020 Hb_002053_130--Hb_171900_020 Hb_000110_300 Hb_000110_300 Hb_003747_210--Hb_000110_300 Hb_002915_060 Hb_002915_060 Hb_003747_210--Hb_002915_060 Hb_010661_010 Hb_010661_010 Hb_003747_210--Hb_010661_010 Hb_003747_210--Hb_004128_030 Hb_007576_200 Hb_007576_200 Hb_003747_210--Hb_007576_200 Hb_001500_030--Hb_010661_010 Hb_001500_030--Hb_004128_030 Hb_001500_030--Hb_000912_100 Hb_001500_030--Hb_002876_210 Hb_001500_030--Hb_003747_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.78332 27.6513 7.53367 16.1558 1.85663 4.77206
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.16152 11.8493 9.51974 6.04352 7.74843

CAGE analysis