Hb_001946_310

Information

Type -
Description -
Location Contig1946: 265324-275042
Sequence    

Annotation

kegg
ID vvi:100256116
description probable ethanolamine kinase
nr
ID XP_012078759.1
description PREDICTED: probable ethanolamine kinase isoform X2 [Jatropha curcas]
swissprot
ID O81024
description Probable ethanolamine kinase OS=Arabidopsis thaliana GN=EMB1187 PE=2 SV=1
trembl
ID A0A067KBK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13308 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable ethanolamine kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19421: 265367-271496
cDNA
(Sanger)
(ID:Location)		 016_D21.ab1: 265367-269090

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001946_310 0.0 - - PREDICTED: probable ethanolamine kinase isoform X2 [Jatropha curcas]
2 Hb_000800_090 0.0833299956 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
3 Hb_001799_060 0.0841321137 - - Rab6 [Hevea brasiliensis]
4 Hb_000402_130 0.0977064547 - - PREDICTED: AP-1 complex subunit mu-2 [Jatropha curcas]
5 Hb_001318_050 0.1035304424 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
6 Hb_003305_020 0.1056803273 - - PREDICTED: AT-hook motif nuclear-localized protein 13-like [Jatropha curcas]
7 Hb_000025_190 0.1093698145 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
8 Hb_005701_120 0.1111623901 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]
9 Hb_009898_040 0.1113539147 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000197_190 0.1128093205 - - PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Jatropha curcas]
11 Hb_003207_020 0.1131646691 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
12 Hb_012022_050 0.1135725933 - - hypothetical protein EUGRSUZ_B02804 [Eucalyptus grandis]
13 Hb_007383_020 0.1142116892 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005648_010 0.1147271131 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
15 Hb_010042_020 0.1150260932 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
16 Hb_001510_020 0.1156339276 - - Diaminopimelate epimerase, putative [Ricinus communis]
17 Hb_033152_070 0.1159527504 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
18 Hb_000928_190 0.1164023475 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
19 Hb_000110_050 0.1197226613 - - -
20 Hb_003988_050 0.1218621446 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_001946_310 Hb_001946_310 Hb_000800_090 Hb_000800_090 Hb_001946_310--Hb_000800_090 Hb_001799_060 Hb_001799_060 Hb_001946_310--Hb_001799_060 Hb_000402_130 Hb_000402_130 Hb_001946_310--Hb_000402_130 Hb_001318_050 Hb_001318_050 Hb_001946_310--Hb_001318_050 Hb_003305_020 Hb_003305_020 Hb_001946_310--Hb_003305_020 Hb_000025_190 Hb_000025_190 Hb_001946_310--Hb_000025_190 Hb_005701_120 Hb_005701_120 Hb_000800_090--Hb_005701_120 Hb_000800_090--Hb_000025_190 Hb_004046_030 Hb_004046_030 Hb_000800_090--Hb_004046_030 Hb_000185_220 Hb_000185_220 Hb_000800_090--Hb_000185_220 Hb_005648_010 Hb_005648_010 Hb_000800_090--Hb_005648_010 Hb_000197_190 Hb_000197_190 Hb_001799_060--Hb_000197_190 Hb_001799_060--Hb_005648_010 Hb_001799_060--Hb_000800_090 Hb_004880_150 Hb_004880_150 Hb_001799_060--Hb_004880_150 Hb_000165_080 Hb_000165_080 Hb_001799_060--Hb_000165_080 Hb_000402_130--Hb_005701_120 Hb_033152_070 Hb_033152_070 Hb_000402_130--Hb_033152_070 Hb_002110_100 Hb_002110_100 Hb_000402_130--Hb_002110_100 Hb_003207_020 Hb_003207_020 Hb_000402_130--Hb_003207_020 Hb_000060_050 Hb_000060_050 Hb_000402_130--Hb_000060_050 Hb_000402_130--Hb_000025_190 Hb_007383_020 Hb_007383_020 Hb_001318_050--Hb_007383_020 Hb_001318_050--Hb_005648_010 Hb_001318_050--Hb_000025_190 Hb_012678_020 Hb_012678_020 Hb_001318_050--Hb_012678_020 Hb_001318_050--Hb_004880_150 Hb_001318_050--Hb_000800_090 Hb_012022_050 Hb_012022_050 Hb_003305_020--Hb_012022_050 Hb_002660_170 Hb_002660_170 Hb_003305_020--Hb_002660_170 Hb_003305_020--Hb_001318_050 Hb_010997_090 Hb_010997_090 Hb_003305_020--Hb_010997_090 Hb_003305_020--Hb_000025_190 Hb_062537_010 Hb_062537_010 Hb_000025_190--Hb_062537_010 Hb_000025_190--Hb_002660_170 Hb_000025_190--Hb_004880_150 Hb_000025_190--Hb_005648_010 Hb_003988_050 Hb_003988_050 Hb_000025_190--Hb_003988_050 Hb_000115_150 Hb_000115_150 Hb_000025_190--Hb_000115_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.641509 1.18566 2.33767 7.46102 0.758519 1.45345
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.18454 2.59434 2.37607 5.47101 3.12965

CAGE analysis